Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2122
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,639,848 | - | DvMF_2121 | 0.67 | -0.2 | |
2,639,858 | - | DvMF_2121 | 0.67 | -0.4 | |
2,639,907 | + | DvMF_2121 | 0.70 | +0.1 | |
2,640,097 | + | DvMF_2121 | 0.82 | +0.0 | |
2,640,150 | - | DvMF_2121 | 0.86 | +0.0 | |
2,640,188 | - | DvMF_2121 | 0.88 | -0.0 | |
2,640,204 | + | DvMF_2121 | 0.89 | +0.4 | |
2,640,368 | + | -0.3 | |||
2,640,368 | + | +0.1 | |||
2,640,381 | + | -0.1 | |||
2,640,674 | + | -0.0 | |||
2,640,787 | - | -0.2 | |||
2,641,300 | - | DvMF_2122 | 0.54 | -1.7 | |
2,641,305 | - | DvMF_2122 | 0.54 | -0.4 | |
2,641,903 | - | +0.4 | |||
2,642,236 | - | +0.9 | |||
2,642,265 | - | -0.1 | |||
2,642,276 | - | -0.3 | |||
2,642,454 | - | DvMF_2123 | 0.28 | +0.1 | |
2,642,455 | + | DvMF_2123 | 0.28 | +0.2 | |
2,642,542 | - | DvMF_2123 | 0.37 | +0.3 | |
2,642,542 | - | DvMF_2123 | 0.37 | -0.0 |
Or see this region's nucleotide sequence