Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2115
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,634,262 | + | DvMF_2114 | 0.18 | -0.4 | |
2,634,267 | + | DvMF_2114 | 0.19 | +0.3 | |
2,634,279 | + | DvMF_2114 | 0.20 | +0.4 | |
2,634,281 | + | DvMF_2114 | 0.21 | +0.4 | |
2,634,327 | + | DvMF_2114 | 0.27 | +0.1 | |
2,634,378 | - | DvMF_2114 | 0.34 | -0.2 | |
2,634,412 | + | DvMF_2114 | 0.39 | -0.1 | |
2,634,440 | - | DvMF_2114 | 0.42 | +0.4 | |
2,634,575 | + | DvMF_2114 | 0.61 | +0.1 | |
2,634,691 | + | DvMF_2114 | 0.77 | -0.1 | |
2,635,102 | - | -0.1 | |||
2,635,205 | - | DvMF_2115 | 0.44 | -0.3 | |
2,635,252 | + | DvMF_2115 | 0.64 | +0.0 | |
2,635,300 | - | DvMF_2115 | 0.84 | +0.2 | |
2,635,329 | + | +0.3 | |||
2,635,446 | + | -0.0 | |||
2,635,580 | - | DvMF_2116 | 0.29 | +0.0 | |
2,635,875 | + | -0.2 | |||
2,635,884 | - | +0.4 | |||
2,636,134 | + | +0.4 |
Or see this region's nucleotide sequence