Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1929 and DvMF_1930 are separated by 120 nucleotides DvMF_1930 and DvMF_1931 are separated by 11 nucleotides DvMF_1931 and DvMF_1932 are separated by 84 nucleotides
DvMF_1929: DvMF_1929 - peptidase M24 (RefSeq), at 2,379,495 to 2,380,565
_1929
DvMF_1930: DvMF_1930 - protein of unknown function DUF336 (RefSeq), at 2,380,686 to 2,381,120
_1930
DvMF_1931: DvMF_1931 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 2,381,132 to 2,383,054
_1931
DvMF_1932: DvMF_1932 - TRAP dicarboxylate transporter, DctP subunit (RefSeq), at 2,383,139 to 2,384,146
_1932
Position (kb)
2381
2382
2383
2384 Strain fitness (log2 ratio)
-1
0
1 at 2380.156 kb on - strand, within DvMF_1929 at 2380.187 kb on + strand, within DvMF_1929 at 2380.210 kb on + strand, within DvMF_1929 at 2380.210 kb on + strand, within DvMF_1929 at 2380.252 kb on + strand, within DvMF_1929 at 2380.260 kb on - strand, within DvMF_1929 at 2380.490 kb on + strand at 2380.661 kb on + strand at 2380.871 kb on + strand, within DvMF_1930 at 2380.906 kb on - strand, within DvMF_1930 at 2381.069 kb on - strand, within DvMF_1930 at 2381.130 kb on + strand at 2381.162 kb on - strand at 2381.190 kb on - strand at 2381.266 kb on + strand at 2381.266 kb on + strand at 2381.539 kb on + strand, within DvMF_1931 at 2381.901 kb on + strand, within DvMF_1931 at 2381.909 kb on - strand, within DvMF_1931 at 2381.945 kb on - strand, within DvMF_1931 at 2382.067 kb on + strand, within DvMF_1931 at 2382.276 kb on - strand, within DvMF_1931 at 2382.652 kb on + strand, within DvMF_1931 at 2382.668 kb on - strand, within DvMF_1931 at 2383.161 kb on + strand at 2383.201 kb on - strand at 2383.324 kb on + strand, within DvMF_1932 at 2383.494 kb on - strand, within DvMF_1932 at 2383.572 kb on - strand, within DvMF_1932 at 2383.644 kb on + strand, within DvMF_1932 at 2383.652 kb on - strand, within DvMF_1932 at 2383.786 kb on - strand, within DvMF_1932 at 2383.816 kb on - strand, within DvMF_1932 at 2383.838 kb on - strand, within DvMF_1932 at 2384.019 kb on - strand, within DvMF_1932
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 2,380,156 - DvMF_1929 0.62 -0.1 2,380,187 + DvMF_1929 0.65 -0.2 2,380,210 + DvMF_1929 0.67 +0.3 2,380,210 + DvMF_1929 0.67 -0.0 2,380,252 + DvMF_1929 0.71 +0.2 2,380,260 - DvMF_1929 0.71 -0.2 2,380,490 + +0.4 2,380,661 + -0.3 2,380,871 + DvMF_1930 0.43 -1.6 2,380,906 - DvMF_1930 0.51 -0.7 2,381,069 - DvMF_1930 0.88 -0.3 2,381,130 + -1.1 2,381,162 - -0.7 2,381,190 - -1.2 2,381,266 + -0.9 2,381,266 + -0.9 2,381,539 + DvMF_1931 0.21 -1.2 2,381,901 + DvMF_1931 0.40 -0.4 2,381,909 - DvMF_1931 0.40 -1.2 2,381,945 - DvMF_1931 0.42 -0.9 2,382,067 + DvMF_1931 0.49 -1.4 2,382,276 - DvMF_1931 0.59 -0.7 2,382,652 + DvMF_1931 0.79 -0.8 2,382,668 - DvMF_1931 0.80 -1.0 2,383,161 + -0.8 2,383,201 - -0.8 2,383,324 + DvMF_1932 0.18 -1.1 2,383,494 - DvMF_1932 0.35 -0.6 2,383,572 - DvMF_1932 0.43 -1.1 2,383,644 + DvMF_1932 0.50 -1.0 2,383,652 - DvMF_1932 0.51 -1.0 2,383,786 - DvMF_1932 0.64 -0.5 2,383,816 - DvMF_1932 0.67 -0.5 2,383,838 - DvMF_1932 0.69 -1.6 2,384,019 - DvMF_1932 0.87 -1.0
Or see this region's nucleotide sequence