Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1732
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,115,922 | - | DvMF_1730 | 0.84 | -0.5 | |
2,116,113 | + | -0.6 | |||
2,116,701 | - | DvMF_1731 | 0.51 | -1.3 | |
2,116,711 | - | DvMF_1731 | 0.53 | -1.0 | |
2,116,725 | - | DvMF_1731 | 0.57 | -0.9 | |
2,117,132 | - | DvMF_1732 | 0.24 | -0.4 | |
2,117,351 | + | DvMF_1732 | 0.47 | -0.4 | |
2,117,534 | + | DvMF_1732 | 0.66 | -0.8 | |
2,117,577 | - | DvMF_1732 | 0.70 | -0.4 | |
2,117,577 | - | DvMF_1732 | 0.70 | -0.7 | |
2,117,585 | + | DvMF_1732 | 0.71 | -0.4 | |
2,117,701 | + | DvMF_1732 | 0.83 | -0.7 | |
2,117,709 | - | DvMF_1732 | 0.84 | +0.2 | |
2,117,723 | + | DvMF_1732 | 0.85 | -0.7 | |
2,117,778 | + | -0.2 | |||
2,117,817 | - | -0.7 | |||
2,117,823 | - | -0.5 | |||
2,117,926 | + | +0.1 | |||
2,118,052 | + | DvMF_1733 | 0.11 | -1.2 | |
2,118,077 | - | DvMF_1733 | 0.12 | -1.0 | |
2,118,133 | + | DvMF_1733 | 0.16 | -0.7 | |
2,118,187 | + | DvMF_1733 | 0.19 | -0.1 | |
2,118,291 | + | DvMF_1733 | 0.25 | -2.0 | |
2,118,665 | + | DvMF_1733 | 0.48 | -1.7 | |
2,118,689 | - | DvMF_1733 | 0.49 | -0.9 |
Or see this region's nucleotide sequence