Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1642
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,021,682 | - | -1.1 | |||
2,021,810 | + | DvMF_1641 | 0.22 | -1.4 | |
2,021,833 | - | DvMF_1641 | 0.24 | -0.7 | |
2,021,904 | - | DvMF_1641 | 0.32 | -1.3 | |
2,022,016 | + | DvMF_1641 | 0.44 | -1.1 | |
2,022,024 | - | DvMF_1641 | 0.45 | -0.7 | |
2,022,120 | + | DvMF_1641 | 0.56 | -0.9 | |
2,022,138 | - | DvMF_1641 | 0.58 | -0.6 | |
2,022,175 | - | DvMF_1641 | 0.62 | -1.2 | |
2,022,175 | - | DvMF_1641 | 0.62 | -1.0 | |
2,022,175 | - | DvMF_1641 | 0.62 | -1.0 | |
2,022,186 | - | DvMF_1641 | 0.63 | -0.0 | |
2,022,238 | - | DvMF_1641 | 0.69 | -1.3 | |
2,022,258 | + | DvMF_1641 | 0.71 | -1.1 | |
2,022,311 | - | DvMF_1641 | 0.77 | -1.7 | |
2,022,334 | - | DvMF_1641 | 0.80 | +0.1 | |
2,022,461 | + | -1.4 | |||
2,022,514 | + | -0.8 | |||
2,022,522 | - | -0.7 | |||
2,022,549 | - | -1.0 | |||
2,022,654 | + | DvMF_1642 | 0.38 | -2.0 | |
2,022,908 | + | -0.8 | |||
2,023,079 | - | -0.7 | |||
2,023,230 | + | DvMF_1643 | 0.13 | -1.1 | |
2,023,292 | + | DvMF_1643 | 0.15 | -1.1 | |
2,023,315 | - | DvMF_1643 | 0.16 | -1.1 | |
2,023,355 | + | DvMF_1643 | 0.17 | -1.6 | |
2,023,574 | - | DvMF_1643 | 0.25 | -0.7 | |
2,023,815 | + | DvMF_1643 | 0.33 | -1.6 |
Or see this region's nucleotide sequence