Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1526
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,879,432 | - | DvMF_1524 | 0.61 | +0.4 | |
1,879,508 | - | DvMF_1524 | 0.73 | -0.9 | |
1,879,787 | + | -0.8 | |||
1,879,795 | - | -1.3 | |||
1,880,029 | + | DvMF_1525 | 0.74 | -1.2 | |
1,880,137 | - | -0.8 | |||
1,880,142 | - | -0.7 | |||
1,880,161 | - | -0.3 | |||
1,880,161 | - | -1.7 | |||
1,880,465 | - | +0.1 | |||
1,880,475 | - | +0.8 | |||
1,880,502 | - | +1.1 | |||
1,880,509 | + | +0.6 | |||
1,880,513 | + | +0.0 | |||
1,880,791 | - | DvMF_1526 | 0.30 | +1.2 | |
1,880,909 | - | DvMF_1526 | 0.40 | +0.8 | |
1,881,126 | - | DvMF_1526 | 0.57 | +0.9 | |
1,881,172 | + | DvMF_1526 | 0.61 | +0.9 | |
1,881,179 | + | DvMF_1526 | 0.61 | +1.1 | |
1,881,378 | - | DvMF_1526 | 0.77 | +1.0 | |
1,881,392 | - | DvMF_1526 | 0.78 | +1.0 | |
1,881,402 | - | DvMF_1526 | 0.79 | +0.9 | |
1,881,949 | + | DvMF_1527 | 0.10 | -1.3 | |
1,882,070 | + | DvMF_1527 | 0.24 | -1.4 | |
1,882,234 | + | DvMF_1527 | 0.44 | -1.1 | |
1,882,403 | - | DvMF_1527 | 0.63 | -1.3 | |
1,882,462 | - | DvMF_1527 | 0.70 | -1.1 |
Or see this region's nucleotide sequence