Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1083 and DvMF_1084 are separated by 238 nucleotides DvMF_1084 and DvMF_1085 are separated by 67 nucleotides DvMF_1085 and DvMF_1086 are separated by 9 nucleotides
DvMF_1083: DvMF_1083 - TPR repeat-containing protein (RefSeq), at 1,322,238 to 1,322,894
_1083
DvMF_1084: DvMF_1084 - OmpA/MotB domain protein (RefSeq), at 1,323,133 to 1,323,858
_1084
DvMF_1085: DvMF_1085 - flagellar motor protein MotA (RefSeq), at 1,323,926 to 1,324,771
_1085
DvMF_1086: DvMF_1086 - hypothetical protein (RefSeq), at 1,324,781 to 1,325,494
_1086
Position (kb)
1323
1324 Strain fitness (log2 ratio)
-1
0
1
2 at 1323.225 kb on + strand, within DvMF_1084 at 1323.226 kb on - strand, within DvMF_1084 at 1323.249 kb on + strand, within DvMF_1084 at 1323.257 kb on - strand, within DvMF_1084 at 1323.299 kb on - strand, within DvMF_1084 at 1323.396 kb on + strand, within DvMF_1084 at 1323.404 kb on - strand, within DvMF_1084 at 1323.490 kb on - strand, within DvMF_1084 at 1324.062 kb on + strand, within DvMF_1085 at 1324.072 kb on - strand, within DvMF_1085 at 1324.138 kb on - strand, within DvMF_1085 at 1324.167 kb on + strand, within DvMF_1085 at 1324.232 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.857 kb on - strand, within DvMF_1086
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 1,323,225 + DvMF_1084 0.13 +1.4 1,323,226 - DvMF_1084 0.13 +0.4 1,323,249 + DvMF_1084 0.16 +1.0 1,323,257 - DvMF_1084 0.17 +1.2 1,323,299 - DvMF_1084 0.23 +1.2 1,323,396 + DvMF_1084 0.36 +1.1 1,323,404 - DvMF_1084 0.37 +1.3 1,323,490 - DvMF_1084 0.49 +1.3 1,324,062 + DvMF_1085 0.16 +2.1 1,324,072 - DvMF_1085 0.17 +1.3 1,324,138 - DvMF_1085 0.25 +1.4 1,324,167 + DvMF_1085 0.28 +1.3 1,324,232 - DvMF_1085 0.36 +1.3 1,324,608 - DvMF_1085 0.81 +1.3 1,324,608 - DvMF_1085 0.81 +1.3 1,324,857 - DvMF_1086 0.11 +0.4
Or see this region's nucleotide sequence