Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1056
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,292,319 | + | DvMF_1055 | 0.28 | +0.8 | |
1,292,327 | - | DvMF_1055 | 0.29 | +0.7 | |
1,292,557 | + | DvMF_1055 | 0.54 | +1.1 | |
1,292,877 | + | DvMF_1055 | 0.88 | +0.8 | |
1,293,089 | + | -1.4 | |||
1,293,358 | - | DvMF_1056 | 0.55 | -0.9 | |
1,293,468 | - | DvMF_1056 | 0.84 | -0.7 | |
1,293,590 | - | -0.7 | |||
1,293,778 | + | -0.5 | |||
1,293,829 | - | -1.1 | |||
1,293,844 | + | -0.3 | |||
1,293,880 | - | -0.8 | |||
1,293,890 | - | -0.8 | |||
1,293,972 | + | -0.5 | |||
1,294,248 | - | DvMF_1057 | 0.24 | -2.0 | |
1,294,358 | + | DvMF_1057 | 0.29 | -1.2 | |
1,294,374 | + | DvMF_1057 | 0.30 | -0.8 | |
1,294,374 | + | DvMF_1057 | 0.30 | -0.9 | |
1,294,400 | + | DvMF_1057 | 0.32 | +0.4 | |
1,294,408 | - | DvMF_1057 | 0.32 | +0.2 | |
1,294,430 | + | DvMF_1057 | 0.33 | -1.0 | |
1,294,482 | + | DvMF_1057 | 0.36 | -1.1 | |
1,294,520 | - | DvMF_1057 | 0.38 | -1.0 |
Or see this region's nucleotide sequence