Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0964

Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0963 and DvMF_0964 are separated by 43 nucleotidesDvMF_0964 and DvMF_0965 are separated by 559 nucleotides DvMF_0963: DvMF_0963 - S-adenosyl-methyltransferase MraW (RefSeq), at 1,168,737 to 1,169,822 _0963 DvMF_0964: DvMF_0964 - cell division protein MraZ (RefSeq), at 1,169,866 to 1,170,315 _0964 DvMF_0965: DvMF_0965 - pyruvate kinase (RefSeq), at 1,170,875 to 1,172,287 _0965 Position (kb) 1169 1170 1171Strain fitness (log2 ratio) -2 -1 0 1at 1169.566 kb on - strand, within DvMF_0963at 1169.613 kb on - strand, within DvMF_0963at 1169.808 kb on - strandat 1169.832 kb on + strandat 1170.035 kb on + strand, within DvMF_0964at 1170.113 kb on + strand, within DvMF_0964at 1170.506 kb on - strandat 1170.507 kb on - strandat 1170.619 kb on - strandat 1170.784 kb on - strandat 1170.825 kb on - strandat 1170.997 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml
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1,169,566 - DvMF_0963 0.76 -1.2
1,169,613 - DvMF_0963 0.81 -2.0
1,169,808 - -1.3
1,169,832 + -1.5
1,170,035 + DvMF_0964 0.38 -1.3
1,170,113 + DvMF_0964 0.55 -1.8
1,170,506 - -0.4
1,170,507 - -1.5
1,170,619 - -0.5
1,170,784 - -0.8
1,170,825 - -1.7
1,170,997 - -2.0

Or see this region's nucleotide sequence