Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0850

Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0849 and DvMF_0850 are separated by 546 nucleotidesDvMF_0850 and DvMF_0851 are separated by 24 nucleotides DvMF_0849: DvMF_0849 - Acyl transferase (RefSeq), at 1,026,168 to 1,027,130 _0849 DvMF_0850: DvMF_0850 - arginyl-tRNA synthetase (RefSeq), at 1,027,677 to 1,029,332 _0850 DvMF_0851: DvMF_0851 - Sporulation domain protein (RefSeq), at 1,029,357 to 1,030,292 _0851 Position (kb) 1027 1028 1029 1030Strain fitness (log2 ratio) -2 -1 0 1at 1027.053 kb on - strandat 1027.068 kb on - strandat 1027.471 kb on - strandat 1029.446 kb on + strandat 1029.724 kb on - strand, within DvMF_0851at 1029.814 kb on - strand, within DvMF_0851at 1030.190 kb on + strand, within DvMF_0851

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml
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1,027,053 - -1.5
1,027,068 - -0.8
1,027,471 - -0.8
1,029,446 + -2.0
1,029,724 - DvMF_0851 0.39 -2.6
1,029,814 - DvMF_0851 0.49 -2.5
1,030,190 + DvMF_0851 0.89 -1.4

Or see this region's nucleotide sequence