Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0469 and DvMF_0470 are separated by 371 nucleotides DvMF_0470 and DvMF_0471 are separated by 410 nucleotides
DvMF_0469: DvMF_0469 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,535 to 550,361
_0469
DvMF_0470: DvMF_0470 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 550,733 to 552,838
_0470
DvMF_0471: DvMF_0471 - DNA repair protein RadA (RefSeq), at 553,249 to 554,727
_0471
Position (kb) 550
551
552
553 Strain fitness (log2 ratio) -1
0
1 at 549.782 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.867 kb on - strand, within DvMF_0469 at 550.533 kb on - strand at 550.788 kb on - strand at 550.940 kb on - strand at 550.946 kb on - strand, within DvMF_0470 at 551.165 kb on - strand, within DvMF_0470 at 551.280 kb on - strand, within DvMF_0470 at 551.571 kb on + strand, within DvMF_0470 at 551.579 kb on - strand, within DvMF_0470 at 552.216 kb on - strand, within DvMF_0470 at 552.277 kb on + strand, within DvMF_0470 at 552.303 kb on - strand, within DvMF_0470 at 552.590 kb on - strand, within DvMF_0470 at 552.591 kb on + strand, within DvMF_0470 at 552.706 kb on + strand at 552.779 kb on + strand at 552.865 kb on + strand at 553.019 kb on + strand at 553.074 kb on + strand at 553.544 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 549,782 + DvMF_0469 0.68 -0.5 549,859 + DvMF_0469 0.72 -0.7 549,859 + DvMF_0469 0.72 -1.5 549,867 - DvMF_0469 0.73 -0.5 550,533 - -0.7 550,788 - -0.5 550,940 - -0.6 550,946 - DvMF_0470 0.10 -0.5 551,165 - DvMF_0470 0.21 -0.5 551,280 - DvMF_0470 0.26 +0.1 551,571 + DvMF_0470 0.40 -0.6 551,579 - DvMF_0470 0.40 -0.4 552,216 - DvMF_0470 0.70 -0.3 552,277 + DvMF_0470 0.73 +0.4 552,303 - DvMF_0470 0.75 -0.9 552,590 - DvMF_0470 0.88 -0.8 552,591 + DvMF_0470 0.88 -1.1 552,706 + -0.8 552,779 + -1.1 552,865 + -0.5 553,019 + -1.1 553,074 + -1.5 553,544 + -0.7
Or see this region's nucleotide sequence