Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0286
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
328,269 | - | DvMF_0285 | 0.77 | -0.8 | |
328,286 | + | DvMF_0285 | 0.77 | -0.5 | |
328,351 | + | DvMF_0285 | 0.79 | -1.0 | |
328,378 | - | DvMF_0285 | 0.80 | -1.5 | |
328,397 | - | DvMF_0285 | 0.80 | -0.1 | |
328,450 | + | DvMF_0285 | 0.82 | -1.2 | |
328,524 | + | DvMF_0285 | 0.84 | -0.9 | |
328,548 | + | DvMF_0285 | 0.85 | -0.6 | |
328,587 | - | DvMF_0285 | 0.86 | -1.1 | |
329,101 | + | -0.7 | |||
329,104 | - | -0.8 | |||
329,165 | - | -0.6 | |||
329,366 | - | DvMF_0286 | 0.12 | -0.6 | |
329,368 | - | DvMF_0286 | 0.12 | -0.7 | |
329,394 | - | DvMF_0286 | 0.15 | -1.1 | |
329,400 | - | DvMF_0286 | 0.15 | -0.8 | |
329,697 | + | DvMF_0286 | 0.39 | -0.3 | |
329,715 | + | DvMF_0286 | 0.40 | +0.1 | |
329,767 | + | DvMF_0286 | 0.44 | -1.2 | |
330,118 | + | DvMF_0286 | 0.73 | -0.9 | |
330,157 | - | DvMF_0286 | 0.76 | -0.2 | |
330,191 | - | DvMF_0286 | 0.78 | -0.7 | |
330,281 | - | DvMF_0286 | 0.86 | -0.9 | |
330,300 | - | DvMF_0286 | 0.87 | -0.9 | |
330,534 | + | -1.4 | |||
330,668 | - | -1.2 |
Or see this region's nucleotide sequence