Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0266

Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0263 and DvMF_0264 are separated by 98 nucleotidesDvMF_0264 and DvMF_0265 are separated by 28 nucleotidesDvMF_0265 and ileS are separated by 117 nucleotidesileS and DvMF_0267 are separated by 365 nucleotides DvMF_0263: DvMF_0263 - tol-pal system protein YbgF (RefSeq), at 300,745 to 301,746 _0263 DvMF_0264: DvMF_0264 - hypothetical protein (RefSeq), at 301,845 to 302,039 _0264 DvMF_0265: DvMF_0265 - lipoprotein signal peptidase (RefSeq), at 302,068 to 302,568 _0265 DvMF_0266: ileS - isoleucyl-tRNA synthetase (RefSeq), at 302,686 to 305,502 ileS DvMF_0267: DvMF_0267 - lipolytic protein G-D-S-L family (RefSeq), at 305,868 to 306,515 _0267 Position (kb) 302 303 304 305 306Strain fitness (log2 ratio) -1 0 1at 301.781 kb on + strandat 301.806 kb on + strandat 302.025 kb on - strandat 302.064 kb on - strandat 305.981 kb on + strand, within DvMF_0267at 306.135 kb on - strand, within DvMF_0267at 306.466 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml
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301,781 + +0.9
301,806 + -0.1
302,025 - +0.0
302,064 - -0.5
305,981 + DvMF_0267 0.17 -0.9
306,135 - DvMF_0267 0.41 +0.5
306,466 - -0.9

Or see this region's nucleotide sequence