Strain Fitness in Shewanella amazonensis SB2B around Sama_3297

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
3,918,409	+		Sama_3296	0.77	-0.8
3,918,416	+		Sama_3296	0.78	+0.5
3,918,417	-		Sama_3296	0.78	-0.5
3,918,417	-		Sama_3296	0.78	+0.5
3,918,417	-		Sama_3296	0.78	-1.5
3,918,417	-		Sama_3296	0.78	+0.2
3,918,555	+		Sama_3296	0.83	-1.8
3,918,584	+		Sama_3296	0.84	-0.1
3,918,585	-		Sama_3296	0.84	-1.1
3,918,585	-		Sama_3296	0.84	-1.1
3,918,612	+		Sama_3296	0.85	-0.5
3,918,612	+		Sama_3296	0.85	-0.5
3,918,613	-		Sama_3296	0.85	-1.3
3,918,629	+		Sama_3296	0.86	-0.8
3,918,795	+				-2.2
3,918,796	-				-0.1
3,918,850	-				-0.8
3,918,850	-				-1.1
3,918,850	-				-1.3
3,918,850	-				-1.1
3,918,935	+				-0.5
3,918,935	+				-0.1
3,918,936	-				-2.6
3,918,989	+				+0.2
3,918,989	+				+0.7
3,919,080	-				+0.5
3,919,094	+				+0.2
3,919,144	+				+0.8
3,919,190	+				-1.8
3,919,190	+				+0.3
3,919,191	-				-0.4
3,919,191	-				+1.1
3,919,191	-				+0.9
3,919,191	-				+0.9
3,919,194	+				-0.1
3,919,194	+				-2.0
3,919,194	+				-0.3
3,919,194	+				+0.0
3,919,194	+				+0.3
3,919,194	+				-1.1
3,919,194	+				-0.0
3,919,194	+				-0.9
3,919,194	+				-0.3
3,919,194	+				+0.7
3,919,194	+				+0.0
3,919,194	+				-0.5
3,919,194	+				-1.7
3,919,194	+				-1.7
3,919,195	-				-0.1
3,919,195	-				-0.4
3,919,195	-				-0.9
3,919,195	-				-0.4
3,919,195	-				+0.2
3,919,195	-				+1.0
3,919,195	-				+0.9
3,919,195	-				-0.9
3,919,195	-				-0.3
3,919,195	-				+0.2
3,919,195	-				+0.2
3,919,195	-				-0.1
3,919,195	-				-1.1
3,919,195	-				-0.2
3,919,195	-				-0.1
3,919,195	-				+0.8
3,919,195	-				-0.4
3,919,195	-				+0.8
3,919,196	+				+1.5
3,919,196	+				+2.2
3,919,196	+				+0.0
3,919,351	+				-2.2
3,919,351	+				+0.1
3,919,360	+				-1.8
3,919,361	-				-2.2
3,919,388	+				-0.1
3,919,388	+				+1.1
3,919,388	+				-2.0
3,919,389	-				-1.1
3,919,389	-				-1.5
3,919,389	-				-0.5
3,919,389	-				-1.3
3,919,390	+				-1.7
3,919,390	+				-1.5
3,919,391	-				-1.1
3,919,577	-		Sama_3297	0.19	-1.1
3,919,577	-		Sama_3297	0.19	-0.1
3,919,607	+		Sama_3297	0.21	-1.5
3,919,613	+		Sama_3297	0.22	-1.8
3,919,777	+		Sama_3297	0.35	-0.8
3,919,959	+		Sama_3297	0.51	-0.8
3,920,004	+		Sama_3297	0.54	-1.3
3,920,004	+		Sama_3297	0.54	-1.5
3,920,149	+		Sama_3297	0.67	-2.3
3,920,335	-		Sama_3297	0.82	-2.4
3,920,430	+				-0.8
3,920,526	+				+0.5
3,920,526	+				-2.8
3,920,526	+				-3.4
3,920,526	+				-3.2
3,920,526	+				-1.5
3,920,527	-				-0.5
3,920,527	-				+0.5
3,920,544	-				+0.5
3,920,554	+				-0.3
3,920,554	+				-1.3
3,920,555	-				+0.3
3,920,555	-				-0.2
3,920,555	-				+1.1
3,920,555	-				-1.2
3,920,562	-				+0.5
3,920,584	-				-1.6
3,920,584	-				-1.7
3,920,614	+				-1.8
3,920,627	+				+1.3
3,920,627	+				-0.5
3,920,627	+				-0.6
3,920,628	-				-0.1
3,920,628	-				-0.3
3,920,659	+				-2.2
3,920,713	+				-1.0
3,920,714	-				+0.2
3,920,714	-				-0.8
3,920,714	-				-1.1
3,920,714	-				+0.5
3,920,755	+				+0.5
3,920,756	-				+0.7
3,920,760	-				+0.1
3,920,788	-				-0.5
3,920,821	+				+0.1
3,920,821	+				+0.8
3,920,822	-				+0.1
3,920,889	+				-0.3
3,920,889	+				-0.3
3,920,889	+				-0.2
3,920,889	+				+0.0
3,920,889	+				+0.7
3,920,889	+				-0.9
3,920,889	+				-2.4
3,920,889	+				+0.5
3,920,890	-				+0.2
3,920,890	-				+0.3
3,920,890	-				-1.1
3,920,890	-				+0.9
3,920,890	-				-1.3
3,920,890	-				+1.2
3,920,890	-				-2.8
3,920,890	-				+0.2
3,920,890	-				-0.5
3,920,890	-				-0.2
3,920,895	+				+0.3
3,920,896	-				+0.9
3,920,967	+				+1.3
3,920,967	+				-0.3
3,920,968	-				-0.8
3,920,968	-				+0.8
3,920,976	-				+0.5
3,921,018	+				-0.4
3,921,066	-				-0.5
3,921,066	-				-0.5
3,921,066	-				+0.5
3,921,066	-				-0.9
3,921,087	+				-2.2
3,921,087	+				-0.0
3,921,088	-				+0.6
3,921,088	-				+0.8
3,921,088	-				+0.6
3,921,088	-				-0.2
3,921,088	-				-0.1
3,921,100	+				+0.9
3,921,100	+				+0.2
3,921,100	+				-0.3
3,921,100	+				-0.5
3,921,100	+				-1.5
3,921,100	+				+1.7
3,921,100	+				-1.1
3,921,100	+				-0.3
3,921,100	+				+0.4
3,921,100	+				-1.1
3,921,100	+				+0.5
3,921,100	+				+1.2
3,921,100	+				-0.8
3,921,101	-				-0.8
3,921,101	-				+0.5
3,921,101	-				+1.5
3,921,101	-				-1.2
3,921,101	-				-0.3
3,921,101	-				+0.7
3,921,101	-				-0.9
3,921,101	-				-0.2
3,921,101	-				+0.5
3,921,101	-				+0.7
3,921,101	-				-1.3
3,921,101	-				+1.3
3,921,101	-				-0.2
3,921,101	-				+0.9
3,921,101	-				-0.9
3,921,101	-				-0.0
3,921,101	-				-0.7
3,921,101	-				-1.2
3,921,101	-				-1.8
3,921,101	-				+0.5
3,921,101	-				+0.5
3,921,103	+				-0.1
3,921,103	+				-0.3
3,921,103	+				+0.4
3,921,103	+				-0.6
3,921,103	+				+1.8
3,921,103	+				+0.7
3,921,103	+				+0.2
3,921,103	+				-0.4
3,921,103	+				-0.4
3,921,103	+				-0.1
3,921,103	+				+1.0
3,921,103	+				-0.4
3,921,103	+				-0.9
3,921,104	-				-0.8
3,921,104	-				-2.1
3,921,104	-				-0.1
3,921,104	-				-1.1
3,921,104	-				+0.5
3,921,104	-				+0.2
3,921,104	-				-2.1
3,921,104	-				-1.5
3,921,104	-				-1.1
3,921,104	-				+0.5
3,921,104	-				-0.4
3,921,138	+				-1.1
3,921,138	+				-1.8
3,921,138	+				-2.0
3,921,139	-				+0.3
3,921,139	-				+0.6
3,921,139	-				-0.3
3,921,139	-				-0.4
3,921,139	-				-0.2
3,921,139	-				+1.5
3,921,182	+				-0.0
3,921,208	+				-0.1
3,921,209	-				-0.2
3,921,241	+				+0.5
3,921,242	-				-0.7
3,921,260	-		Sama_3298	0.10	+1.7
3,921,348	-		Sama_3298	0.12	-0.8
3,921,348	-		Sama_3298	0.12	+0.6
3,921,363	-		Sama_3298	0.12	+0.1
3,921,375	+		Sama_3298	0.13	-1.1
3,921,375	+		Sama_3298	0.13	-1.2
3,921,376	-		Sama_3298	0.13	+0.6
3,921,376	-		Sama_3298	0.13	-0.4
3,921,376	-		Sama_3298	0.13	-0.5
3,921,376	-		Sama_3298	0.13	-1.5
3,921,379	+		Sama_3298	0.13	+0.5
3,921,379	+		Sama_3298	0.13	-0.1
3,921,379	+		Sama_3298	0.13	-0.2
3,921,379	+		Sama_3298	0.13	-1.3
3,921,380	-		Sama_3298	0.13	-1.2
3,921,380	-		Sama_3298	0.13	-0.4
3,921,380	-		Sama_3298	0.13	-0.4
3,921,380	-		Sama_3298	0.13	+0.6
3,921,408	+		Sama_3298	0.13	+0.2
3,921,408	+		Sama_3298	0.13	-0.3
3,921,408	+		Sama_3298	0.13	-0.5
3,921,408	+		Sama_3298	0.13	-2.1
3,921,408	+		Sama_3298	0.13	+1.0
3,921,408	+		Sama_3298	0.13	+1.9
3,921,408	+		Sama_3298	0.13	-0.4
3,921,408	+		Sama_3298	0.13	-0.1
3,921,408	+		Sama_3298	0.13	-0.4
3,921,408	+		Sama_3298	0.13	-0.1
3,921,409	-		Sama_3298	0.13	-0.0
3,921,409	-		Sama_3298	0.13	+0.3
3,921,409	-		Sama_3298	0.13	+0.2
3,921,409	-		Sama_3298	0.13	-0.6
3,921,409	-		Sama_3298	0.13	-1.2
3,921,430	+		Sama_3298	0.14	-0.1
3,921,430	+		Sama_3298	0.14	-0.5
3,921,430	+		Sama_3298	0.14	-0.1
3,921,430	+		Sama_3298	0.14	+0.8
3,921,430	+		Sama_3298	0.14	+1.5
3,921,430	+		Sama_3298	0.14	+0.3
3,921,430	+		Sama_3298	0.14	-0.8
3,921,430	+		Sama_3298	0.14	+0.3
3,921,430	+		Sama_3298	0.14	+1.0
3,921,430	+		Sama_3298	0.14	+0.2
3,921,430	+		Sama_3298	0.14	+0.5
3,921,430	+		Sama_3298	0.14	+0.5
3,921,430	+		Sama_3298	0.14	+0.7
3,921,430	+		Sama_3298	0.14	-0.3
3,921,430	+		Sama_3298	0.14	+0.2
3,921,430	+		Sama_3298	0.14	-2.1
3,921,430	+		Sama_3298	0.14	+0.5
3,921,431	-		Sama_3298	0.14	+0.0
3,921,431	-		Sama_3298	0.14	+0.5
3,921,431	-		Sama_3298	0.14	-2.2
3,921,431	-		Sama_3298	0.14	-1.8
3,921,431	-		Sama_3298	0.14	-0.6
3,921,431	-		Sama_3298	0.14	-0.4
3,921,431	-		Sama_3298	0.14	+0.7
3,921,431	-		Sama_3298	0.14	+0.5
3,921,431	-		Sama_3298	0.14	+0.4
3,921,431	-		Sama_3298	0.14	-0.3
3,921,431	-		Sama_3298	0.14	-1.4
3,921,431	-		Sama_3298	0.14	-0.8
3,921,431	-		Sama_3298	0.14	+0.5
3,921,431	-		Sama_3298	0.14	-1.0
3,921,431	-		Sama_3298	0.14	-0.8
3,921,431	-		Sama_3298	0.14	-0.0
3,921,431	-		Sama_3298	0.14	-0.4
3,921,431	-		Sama_3298	0.14	-0.8
3,921,434	+		Sama_3298	0.14	-0.7
3,921,434	+		Sama_3298	0.14	+0.9
3,921,434	+		Sama_3298	0.14	-0.3
3,921,434	+		Sama_3298	0.14	+0.5
3,921,434	+		Sama_3298	0.14	-0.1
3,921,434	+		Sama_3298	0.14	-0.1
3,921,434	+		Sama_3298	0.14	+0.2
3,921,434	+		Sama_3298	0.14	+0.0
3,921,434	+		Sama_3298	0.14	-0.8
3,921,434	+		Sama_3298	0.14	+1.1
3,921,435	-		Sama_3298	0.14	+1.1
3,921,435	-		Sama_3298	0.14	-0.1
3,921,435	-		Sama_3298	0.14	+1.5
3,921,435	-		Sama_3298	0.14	-0.7
3,921,435	-		Sama_3298	0.14	-0.7
3,921,435	-		Sama_3298	0.14	+0.2
3,921,435	-		Sama_3298	0.14	-1.0
3,921,495	+		Sama_3298	0.15	-0.2
3,921,495	+		Sama_3298	0.15	+0.3
3,921,496	-		Sama_3298	0.15	+0.3
3,921,525	+		Sama_3298	0.16	-0.8
3,921,525	+		Sama_3298	0.16	-1.2
3,921,526	-		Sama_3298	0.16	-0.6
3,921,542	+		Sama_3298	0.16	-0.1
3,921,542	+		Sama_3298	0.16	-1.3
3,921,542	+		Sama_3298	0.16	-1.3
3,921,543	-		Sama_3298	0.16	+0.2