Strain Fitness in Shewanella amazonensis SB2B around Sama_2091

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
2,533,176	-		Sama_2090	0.22	+0.5
2,533,176	-		Sama_2090	0.22	-0.5
2,533,176	-		Sama_2090	0.22	-0.1
2,533,176	-		Sama_2090	0.22	-0.8
2,533,176	-		Sama_2090	0.22	-0.5
2,533,176	-		Sama_2090	0.22	+0.1
2,533,254	-		Sama_2090	0.41	+0.8
2,533,254	-		Sama_2090	0.41	-1.8
2,533,432	-		Sama_2090	0.86	+0.1
2,533,432	-		Sama_2090	0.86	+0.0
2,533,434	-		Sama_2090	0.86	+2.9
2,533,434	-		Sama_2090	0.86	+1.4
2,533,434	-		Sama_2090	0.86	-0.6
2,533,434	-		Sama_2090	0.86	-0.1
2,533,454	-				-1.4
2,533,462	-				-0.3
2,533,462	-				+0.4
2,533,465	-				-0.9
2,533,465	-				-0.1
2,533,528	-				+1.1
2,533,528	-				+0.9
2,533,531	-				+0.1
2,533,531	-				-0.2
2,533,531	-				+0.5
2,533,531	-				-0.5
2,533,531	-				+0.7
2,533,531	-				+1.1
2,533,533	-				+0.4
2,533,533	-				+0.8
2,533,533	-				+0.5
2,533,533	-				+0.2
2,533,533	-				-0.1
2,533,533	-				-0.4
2,533,537	-				-0.5
2,533,588	+				-0.3
2,533,595	+				-0.5
2,533,595	+				+0.9
2,533,617	+				-1.6
2,533,617	+				+0.5
2,533,617	+				+1.0
2,533,618	-				+0.0
2,533,618	-				-0.4
2,533,618	-				+0.5
2,533,667	+				+0.1
2,533,695	+				+2.5
2,533,695	+				-0.1
2,533,695	+				+0.9
2,533,695	+				+0.5
2,533,696	-				-1.1
2,533,696	-				+1.5
2,533,696	-				-1.6
2,533,696	-				-0.3
2,533,828	+				-0.3
2,533,828	+				-0.9
2,533,828	+				+1.1
2,533,828	+				+0.3
2,533,829	-				-0.1
2,533,829	-				+0.4
2,533,829	-				+0.7
2,533,829	-				-0.6
2,533,838	+				+0.9
2,533,841	+				-1.6
2,533,884	+		Sama_2091	0.11	-0.1
2,533,885	-		Sama_2091	0.11	+0.2
2,533,929	+		Sama_2091	0.13	-0.3
2,533,963	-		Sama_2091	0.15	+1.3
2,533,985	+		Sama_2091	0.16	-1.5
2,533,985	+		Sama_2091	0.16	-1.1
2,533,986	-		Sama_2091	0.16	+0.1
2,533,986	-		Sama_2091	0.16	-1.2
2,533,986	-		Sama_2091	0.16	-0.7
2,534,011	+		Sama_2091	0.17	-1.5
2,534,011	+		Sama_2091	0.17	+0.2
2,534,012	-		Sama_2091	0.17	+0.9
2,534,018	+		Sama_2091	0.17	-1.5
2,534,019	-		Sama_2091	0.17	-0.8
2,534,066	+		Sama_2091	0.19	+2.1
2,534,095	+		Sama_2091	0.21	-0.2
2,534,106	+		Sama_2091	0.21	-0.5
2,534,133	+		Sama_2091	0.23	+0.3
2,534,169	+		Sama_2091	0.24	+0.1
2,534,170	-		Sama_2091	0.24	-0.5
2,534,170	-		Sama_2091	0.24	-0.9
2,534,170	-		Sama_2091	0.24	+0.1
2,534,262	+		Sama_2091	0.29	+0.9
2,534,263	-		Sama_2091	0.29	+0.1
2,534,288	+		Sama_2091	0.30	-1.6
2,534,288	+		Sama_2091	0.30	-0.5
2,534,343	+		Sama_2091	0.32	+0.4
2,534,344	-		Sama_2091	0.32	+0.1
2,534,345	+		Sama_2091	0.32	+0.1
2,534,345	+		Sama_2091	0.32	+1.8
2,534,345	+		Sama_2091	0.32	-0.1
2,534,345	+		Sama_2091	0.32	-1.1
2,534,346	-		Sama_2091	0.32	-0.6
2,534,346	-		Sama_2091	0.32	+0.4
2,534,346	-		Sama_2091	0.32	+0.1
2,534,346	-		Sama_2091	0.32	+0.7
2,534,362	+		Sama_2091	0.33	+1.0
2,534,386	+		Sama_2091	0.34	-0.4
2,534,386	+		Sama_2091	0.34	+0.9
2,534,387	-		Sama_2091	0.34	+0.8
2,534,387	-		Sama_2091	0.34	-0.3
2,534,388	+		Sama_2091	0.34	-0.2
2,534,388	+		Sama_2091	0.34	-0.9
2,534,389	-		Sama_2091	0.34	-1.1
2,534,389	-		Sama_2091	0.34	-0.6
2,534,389	-		Sama_2091	0.34	+2.8
2,534,451	+		Sama_2091	0.37	-2.2
2,534,451	+		Sama_2091	0.37	+0.4
2,534,451	+		Sama_2091	0.37	-0.5
2,534,451	+		Sama_2091	0.37	+0.4
2,534,451	+		Sama_2091	0.37	-0.3
2,534,451	+		Sama_2091	0.37	-0.5
2,534,451	+		Sama_2091	0.37	-0.3
2,534,451	+		Sama_2091	0.37	-0.1
2,534,451	+		Sama_2091	0.37	-0.1
2,534,451	+		Sama_2091	0.37	+0.2
2,534,452	-		Sama_2091	0.37	+1.3
2,534,452	-		Sama_2091	0.37	-0.9
2,534,452	-		Sama_2091	0.37	-0.4
2,534,452	-		Sama_2091	0.37	+0.5
2,534,452	-		Sama_2091	0.37	+2.3
2,534,452	-		Sama_2091	0.37	-0.4
2,534,452	-		Sama_2091	0.37	-0.6
2,534,472	-		Sama_2091	0.38	-0.4
2,534,506	+		Sama_2091	0.40	+0.2
2,534,507	-		Sama_2091	0.40	+0.7
2,534,517	+		Sama_2091	0.40	+0.0
2,534,540	+		Sama_2091	0.41	-0.1
2,534,540	+		Sama_2091	0.41	+2.3
2,534,540	+		Sama_2091	0.41	-0.9
2,534,540	+		Sama_2091	0.41	+0.9
2,534,540	+		Sama_2091	0.41	+1.2
2,534,540	+		Sama_2091	0.41	-0.4
2,534,541	-		Sama_2091	0.41	+0.7
2,534,541	-		Sama_2091	0.41	+0.9
2,534,541	-		Sama_2091	0.41	-0.4
2,534,544	+		Sama_2091	0.42	+0.6
2,534,544	+		Sama_2091	0.42	-1.0
2,534,544	+		Sama_2091	0.42	+0.9
2,534,544	+		Sama_2091	0.42	+0.7
2,534,544	+		Sama_2091	0.42	-0.7
2,534,544	+		Sama_2091	0.42	-1.4
2,534,544	+		Sama_2091	0.42	-0.6
2,534,544	+		Sama_2091	0.42	-1.1
2,534,544	+		Sama_2091	0.42	+0.5
2,534,544	+		Sama_2091	0.42	+0.2
2,534,545	-		Sama_2091	0.42	+0.2
2,534,545	-		Sama_2091	0.42	+0.2
2,534,545	-		Sama_2091	0.42	+0.4
2,534,545	-		Sama_2091	0.42	+0.1
2,534,545	-		Sama_2091	0.42	+1.4
2,534,545	-		Sama_2091	0.42	-0.2
2,534,545	-		Sama_2091	0.42	-2.2
2,534,545	-		Sama_2091	0.42	-0.1
2,534,545	-		Sama_2091	0.42	-0.4
2,534,545	-		Sama_2091	0.42	+1.6
2,534,545	-		Sama_2091	0.42	+0.5
2,534,560	-		Sama_2091	0.42	+0.1
2,534,560	-		Sama_2091	0.42	-0.9
2,534,562	+		Sama_2091	0.42	-0.9
2,534,568	+		Sama_2091	0.43	+0.9
2,534,568	+		Sama_2091	0.43	-0.2
2,534,639	+		Sama_2091	0.46	+0.9
2,534,640	-		Sama_2091	0.46	+0.9
2,534,640	-		Sama_2091	0.46	-0.9
2,534,656	-		Sama_2091	0.47	-0.8
2,534,656	-		Sama_2091	0.47	-1.0
2,534,656	-		Sama_2091	0.47	+1.5
2,534,688	+		Sama_2091	0.48	-0.6
2,534,689	-		Sama_2091	0.48	-1.9
2,534,689	-		Sama_2091	0.48	+1.8
2,534,716	+		Sama_2091	0.50	-0.1
2,534,750	+		Sama_2091	0.51	-1.6
2,534,758	+		Sama_2091	0.52	-1.6
2,534,759	-		Sama_2091	0.52	-1.1
2,534,759	-		Sama_2091	0.52	+0.1
2,534,789	-		Sama_2091	0.53	-1.1
2,534,792	+		Sama_2091	0.53	+0.0
2,534,793	-		Sama_2091	0.53	-1.4
2,534,793	-		Sama_2091	0.53	+0.8
2,534,833	+		Sama_2091	0.55	+0.2
2,534,833	+		Sama_2091	0.55	-0.6
2,534,834	-		Sama_2091	0.55	-0.9
2,534,838	+		Sama_2091	0.55	+0.9
2,534,839	-		Sama_2091	0.55	-0.4
2,534,871	+		Sama_2091	0.57	-1.1
2,534,909	-		Sama_2091	0.59	-0.6
2,534,960	-		Sama_2091	0.61	+0.1
2,534,990	-		Sama_2091	0.62	-0.6
2,535,045	+		Sama_2091	0.65	-0.6
2,535,045	+		Sama_2091	0.65	-0.1
2,535,045	+		Sama_2091	0.65	-0.9
2,535,046	-		Sama_2091	0.65	+0.9
2,535,046	-		Sama_2091	0.65	-1.6
2,535,046	-		Sama_2091	0.65	-0.1
2,535,047	+		Sama_2091	0.65	+0.9
2,535,048	-		Sama_2091	0.65	-0.3
2,535,055	+		Sama_2091	0.65	-0.3
2,535,055	+		Sama_2091	0.65	-1.6
2,535,056	-		Sama_2091	0.65	+0.6
2,535,056	-		Sama_2091	0.65	-1.2
2,535,090	+		Sama_2091	0.67	-0.1
2,535,105	+		Sama_2091	0.68	+0.6
2,535,105	+		Sama_2091	0.68	-1.6
2,535,106	-		Sama_2091	0.68	-0.1
2,535,156	+		Sama_2091	0.70	-1.8
2,535,157	-		Sama_2091	0.70	-0.5
2,535,157	-		Sama_2091	0.70	-1.1
2,535,157	-		Sama_2091	0.70	+1.3
2,535,157	-		Sama_2091	0.70	+0.2
2,535,294	+		Sama_2091	0.76	+0.1
2,535,294	+		Sama_2091	0.76	-2.5
2,535,411	+		Sama_2091	0.82	-1.1
2,535,412	-		Sama_2091	0.82	+1.4
2,535,452	-		Sama_2091	0.84	-0.1
2,535,452	-		Sama_2091	0.84	+0.5
2,535,535	+		Sama_2091	0.88	-2.0
2,535,555	+		Sama_2091	0.89	+1.3
2,535,555	+		Sama_2091	0.89	+0.4
2,535,556	-		Sama_2091	0.89	+1.8
2,535,556	-		Sama_2091	0.89	+0.1
2,535,665	+				+0.4
2,535,780	-				-0.6
2,535,780	-				-2.6
2,535,847	+				+0.4
2,535,848	-				-0.1
2,535,848	-				-0.1
2,535,848	-				-0.5
2,535,848	-				+0.9
2,535,848	-				+0.1
2,535,937	-				-0.9
2,535,937	-				+1.4
2,536,095	+				-0.1
2,536,194	+				+0.7
2,536,194	+				+0.2
2,536,235	+				+0.5
2,536,329	+				-1.3
2,536,330	-				-0.5
2,536,330	-				+0.2
2,536,332	-				+1.5
2,536,355	+				-0.5
2,536,479	-		Sama_2092	0.15	+5.3
2,536,479	-		Sama_2092	0.15	+3.8
2,536,562	-		Sama_2092	0.24	+4.8
2,536,562	-		Sama_2092	0.24	+6.2
2,536,571	+		Sama_2092	0.25	+5.2
2,536,577	+		Sama_2092	0.26	+5.4
2,536,606	+		Sama_2092	0.29	+5.9
2,536,607	-		Sama_2092	0.30	+6.0
2,536,607	-		Sama_2092	0.30	+5.4
2,536,706	-		Sama_2092	0.41	+4.9
2,536,745	-		Sama_2092	0.45	+6.2
2,536,745	-		Sama_2092	0.45	+5.0
2,536,745	-		Sama_2092	0.45	+6.0
2,536,787	+		Sama_2092	0.50	+6.9
2,536,787	+		Sama_2092	0.50	+5.2
2,536,787	+		Sama_2092	0.50	+4.5
2,536,787	+		Sama_2092	0.50	+5.3
2,536,788	-		Sama_2092	0.50	+7.3
2,536,801	+		Sama_2092	0.52	+5.2