Strain Fitness in Shewanella amazonensis SB2B around Sama_1716

Experiment: Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine
2,097,289	-		Sama_1715	0.23	-0.3
2,097,289	-		Sama_1715	0.23	-0.7
2,097,370	-		Sama_1715	0.31	+0.8
2,097,403	-		Sama_1715	0.34	-0.5
2,097,454	-		Sama_1715	0.39	+0.4
2,097,599	-		Sama_1715	0.52	-0.8
2,097,599	-		Sama_1715	0.52	+1.3
2,097,731	-		Sama_1715	0.65	-0.1
2,097,736	+		Sama_1715	0.65	+1.1
2,097,737	-		Sama_1715	0.65	-0.5
2,097,773	-		Sama_1715	0.69	+0.1
2,097,773	-		Sama_1715	0.69	-0.7
2,098,019	+				+0.5
2,098,185	+				-0.1
2,098,190	+				-1.2
2,098,190	+				+0.5
2,098,190	+				-0.2
2,098,190	+				-1.5
2,098,191	-				-0.1
2,098,191	-				+0.7
2,098,194	+				+0.8
2,098,194	+				-0.8
2,098,194	+				+0.1
2,098,194	+				+1.6
2,098,194	+				-0.7
2,098,194	+				+1.0
2,098,195	-				-2.2
2,098,350	-				-0.6
2,098,350	-				+0.5
2,098,509	-		Sama_1716	0.13	+3.5
2,098,530	+		Sama_1716	0.14	+0.4
2,098,531	-		Sama_1716	0.14	-1.2
2,098,563	+		Sama_1716	0.15	-0.0
2,098,581	+		Sama_1716	0.15	-0.3
2,098,581	+		Sama_1716	0.15	-1.5
2,098,581	+		Sama_1716	0.15	-0.2
2,098,581	+		Sama_1716	0.15	-0.4
2,098,582	-		Sama_1716	0.16	-0.5
2,098,582	-		Sama_1716	0.16	-0.4
2,098,582	-		Sama_1716	0.16	-0.8
2,098,587	+		Sama_1716	0.16	-2.7
2,098,587	+		Sama_1716	0.16	-1.5
2,098,587	+		Sama_1716	0.16	+0.6
2,098,587	+		Sama_1716	0.16	-0.2
2,098,587	+		Sama_1716	0.16	-1.9
2,098,587	+		Sama_1716	0.16	+0.5
2,098,588	-		Sama_1716	0.16	-0.2
2,098,604	+		Sama_1716	0.16	-0.4
2,098,788	-		Sama_1716	0.22	+0.2
2,098,914	+		Sama_1716	0.26	-0.3
2,098,915	-		Sama_1716	0.26	+2.0
2,098,916	+		Sama_1716	0.26	+0.0
2,098,944	+		Sama_1716	0.27	+0.8
2,098,944	+		Sama_1716	0.27	+0.5
2,098,945	-		Sama_1716	0.27	-1.0
2,099,164	+		Sama_1716	0.35	-0.2
2,099,201	+		Sama_1716	0.36	+1.4
2,099,222	+		Sama_1716	0.37	-0.2
2,099,222	+		Sama_1716	0.37	+0.5
2,099,243	+		Sama_1716	0.37	+0.2
2,099,413	+		Sama_1716	0.43	-0.3
2,099,493	+		Sama_1716	0.45	+0.5
2,099,523	+		Sama_1716	0.46	-2.9
2,099,629	+		Sama_1716	0.50	+0.1
2,099,630	-		Sama_1716	0.50	-0.9
2,099,663	-		Sama_1716	0.51	+0.8
2,099,750	+		Sama_1716	0.54	-1.0
2,099,750	+		Sama_1716	0.54	-1.0
2,099,751	-		Sama_1716	0.54	+0.2
2,099,751	-		Sama_1716	0.54	+1.1
2,099,790	+		Sama_1716	0.55	-1.5
2,099,790	+		Sama_1716	0.55	-1.2
2,099,790	+		Sama_1716	0.55	+2.4
2,099,790	+		Sama_1716	0.55	-0.5
2,099,790	+		Sama_1716	0.55	+0.1
2,099,791	-		Sama_1716	0.55	+0.1
2,099,794	+		Sama_1716	0.55	-0.9
2,099,817	+		Sama_1716	0.56	+0.2
2,099,818	-		Sama_1716	0.56	+0.6
2,099,818	-		Sama_1716	0.56	+0.4
2,099,818	-		Sama_1716	0.56	-0.3
2,099,882	+		Sama_1716	0.58	+0.6
2,099,891	+		Sama_1716	0.58	-1.3
2,099,925	+		Sama_1716	0.60	-0.3
2,099,926	-		Sama_1716	0.60	+1.2
2,099,952	+		Sama_1716	0.60	+1.4
2,099,968	+		Sama_1716	0.61	+0.6
2,100,008	-		Sama_1716	0.62	+1.9
2,100,069	-		Sama_1716	0.64	-0.3
2,100,069	-		Sama_1716	0.64	+0.5
2,100,130	+		Sama_1716	0.66	+0.4
2,100,237	+		Sama_1716	0.70	+0.1
2,100,314	+		Sama_1716	0.72	+1.1
2,100,317	+		Sama_1716	0.72	-0.3
2,100,317	+		Sama_1716	0.72	-0.2
2,100,318	-		Sama_1716	0.73	+0.1
2,100,318	-		Sama_1716	0.73	-0.8
2,100,318	-		Sama_1716	0.73	+0.8
2,100,421	-		Sama_1716	0.76	-1.3
2,100,478	+		Sama_1716	0.78	-0.2
2,100,576	-		Sama_1716	0.81	+0.5
2,100,629	+		Sama_1716	0.83	-0.1
2,100,630	-		Sama_1716	0.83	-1.4
2,100,636	+		Sama_1716	0.83	-1.4
2,100,637	-		Sama_1716	0.83	-0.8
2,100,637	-		Sama_1716	0.83	-0.4
2,100,645	+		Sama_1716	0.83	+0.2
2,100,645	+		Sama_1716	0.83	+0.1
2,100,645	+		Sama_1716	0.83	+0.2
2,100,645	+		Sama_1716	0.83	-0.1
2,100,646	-		Sama_1716	0.83	-0.8
2,100,646	-		Sama_1716	0.83	+0.4
2,100,646	-		Sama_1716	0.83	-0.9
2,100,646	-		Sama_1716	0.83	+0.1
2,100,787	+		Sama_1716	0.88	+0.2
2,101,061	+				+1.0
2,101,061	+				+2.4
2,101,061	+				+1.2
2,101,062	-				-0.2
2,101,062	-				-1.8
2,101,062	-				-0.9
2,101,062	-				+0.8
2,101,062	-				+0.8
2,101,117	-				-0.8
2,101,117	-				-0.9
2,101,188	+				-0.0
2,101,190	+				+1.5
2,101,190	+				-0.7
2,101,190	+				+0.2
2,101,191	-				-0.0
2,101,191	-				+0.3
2,101,191	-				+0.1
2,101,204	-				-0.8
2,101,204	-				+0.5
2,101,254	+				-0.6
2,101,255	-				-0.8
2,101,255	-				+2.4
2,101,263	+				+0.3
2,101,263	+				-2.8
2,101,264	-				-0.1
2,101,293	-				+0.5
2,101,322	+				-0.3
2,101,340	+				+0.3
2,101,340	+				-0.1
2,101,340	+				+0.9
2,101,340	+				-0.2
2,101,340	+				-0.4
2,101,341	-				+0.3
2,101,341	-				-0.2
2,101,341	-				-0.7
2,101,349	+				-1.5
2,101,356	+				+0.5
2,101,356	+				+0.5
2,101,356	+				+1.2
2,101,356	+				-0.4
2,101,356	+				+1.1
2,101,356	+				+0.6
2,101,356	+				-0.8
2,101,357	-				-0.4
2,101,357	-				-0.2
2,101,357	-				+0.4
2,101,369	-				-1.2
2,101,465	-				+1.8
2,101,469	+				+0.2
2,101,470	-				-0.7
2,101,506	+				-0.5
2,101,525	+				+0.8
2,101,526	-				-0.8
2,101,544	+				+0.2
2,101,687	+				-0.5
2,101,719	+				+0.2
2,101,719	+				-0.2
2,101,749	+				+0.2
2,101,750	-				-1.5
2,101,750	-				-1.5
2,101,785	-				-2.0
2,101,838	+				+0.8
2,101,838	+				+0.4
2,101,839	-				-1.8
2,101,839	-				-0.5
2,101,839	-				-1.9
2,101,839	-				-2.7
2,101,839	-				-0.8
2,101,861	+				-2.6
2,101,862	-				-2.3
2,101,862	-				+0.8
2,101,862	-				+2.1
2,101,862	-				-0.9
2,101,862	-				-0.2
2,101,971	+		Sama_1717	0.11	-2.8
2,101,972	-		Sama_1717	0.11	-2.5
2,101,972	-		Sama_1717	0.11	-2.2
2,101,980	+		Sama_1717	0.12	+1.2
2,101,989	+		Sama_1717	0.12	-1.2
2,101,989	+		Sama_1717	0.12	-0.6
2,101,989	+		Sama_1717	0.12	-2.5
2,101,990	-		Sama_1717	0.12	-0.6
2,101,990	-		Sama_1717	0.12	-3.1
2,102,008	+		Sama_1717	0.13	-1.3
2,102,068	+		Sama_1717	0.16	-1.8
2,102,068	+		Sama_1717	0.16	-1.4
2,102,068	+		Sama_1717	0.16	-1.2
2,102,068	+		Sama_1717	0.16	-1.7
2,102,069	-		Sama_1717	0.17	-3.7
2,102,069	-		Sama_1717	0.17	-2.0
2,102,142	-		Sama_1717	0.21	-0.4