Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2951
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,722,620 | - | DvMF_2950 | 0.40 | -0.6 | |
| 3,722,672 | + | DvMF_2950 | 0.46 | -0.1 | |
| 3,722,680 | - | DvMF_2950 | 0.47 | -0.9 | |
| 3,722,732 | + | DvMF_2950 | 0.53 | -0.5 | |
| 3,722,762 | - | DvMF_2950 | 0.56 | -2.2 | |
| 3,722,954 | - | DvMF_2950 | 0.78 | -0.9 | |
| 3,722,954 | - | DvMF_2950 | 0.78 | -1.5 | |
| 3,723,500 | - | DvMF_2951 | 0.20 | -0.2 | |
| 3,723,607 | + | DvMF_2951 | 0.36 | +0.1 | |
| 3,723,615 | - | DvMF_2951 | 0.38 | +0.3 | |
| 3,723,912 | + | DvMF_2951 | 0.84 | -0.2 | |
| 3,724,013 | - | -0.3 | |||
| 3,724,013 | - | -0.3 | |||
| 3,724,079 | + | -0.8 | |||
| 3,724,120 | - | +0.3 | |||
| 3,724,163 | - | -0.2 | |||
| 3,724,644 | - | DvMF_2952 | 0.50 | +0.2 | |
| 3,724,688 | + | DvMF_2952 | 0.58 | +0.1 | |
| 3,724,754 | - | DvMF_2952 | 0.68 | -0.2 | |
| 3,724,758 | - | DvMF_2952 | 0.69 | -0.3 | |
| 3,724,991 | + | +0.4 |
Or see this region's nucleotide sequence