Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1803
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,203,289 | - | DvMF_1802 | 0.35 | +0.1 | |
2,203,448 | + | DvMF_1802 | 0.49 | -0.4 | |
2,203,509 | + | DvMF_1802 | 0.55 | +0.4 | |
2,203,746 | - | DvMF_1802 | 0.76 | +0.1 | |
2,203,779 | + | DvMF_1802 | 0.79 | -0.8 | |
2,203,881 | - | DvMF_1802 | 0.89 | -0.9 | |
2,203,996 | - | -0.6 | |||
2,204,074 | - | -0.3 | |||
2,204,076 | + | -0.3 | |||
2,204,103 | + | -0.1 | |||
2,204,111 | - | +1.0 | |||
2,204,173 | - | -0.7 | |||
2,204,542 | - | DvMF_1803 | 0.53 | +0.4 | |
2,204,599 | + | DvMF_1803 | 0.61 | +0.1 | |
2,204,604 | - | DvMF_1803 | 0.62 | -0.5 | |
2,204,782 | + | DvMF_1803 | 0.87 | +0.6 | |
2,204,945 | + | -0.2 | |||
2,204,976 | - | +0.0 | |||
2,205,011 | + | -0.3 | |||
2,205,061 | - | DvMF_1804 | 0.13 | +0.3 | |
2,205,103 | + | DvMF_1804 | 0.18 | -0.8 | |
2,205,166 | - | DvMF_1804 | 0.25 | -0.4 | |
2,205,248 | + | DvMF_1804 | 0.34 | -0.0 | |
2,205,258 | + | DvMF_1804 | 0.35 | -0.3 | |
2,205,515 | + | DvMF_1804 | 0.63 | -0.4 | |
2,205,568 | + | DvMF_1804 | 0.69 | -0.9 | |
2,205,571 | - | DvMF_1804 | 0.69 | -0.2 |
Or see this region's nucleotide sequence