Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1497
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,846,933 | - | DvMF_1496 | 0.28 | -1.6 | |
1,847,048 | + | DvMF_1496 | 0.39 | -1.7 | |
1,847,073 | + | DvMF_1496 | 0.42 | -0.8 | |
1,847,249 | - | DvMF_1496 | 0.59 | -2.8 | |
1,847,275 | - | DvMF_1496 | 0.62 | -0.5 | |
1,847,298 | + | DvMF_1496 | 0.64 | -1.9 | |
1,847,365 | - | DvMF_1496 | 0.71 | -1.2 | |
1,847,579 | - | -1.3 | |||
1,847,651 | - | -0.2 | |||
1,847,657 | + | -0.3 | |||
1,847,695 | + | -0.7 | |||
1,847,703 | - | -0.5 | |||
1,847,703 | - | -0.2 | |||
1,847,755 | + | -1.5 | |||
1,847,926 | - | DvMF_1497 | 0.23 | -2.0 | |
1,848,068 | + | DvMF_1497 | 0.35 | -1.4 | |
1,848,252 | + | DvMF_1497 | 0.51 | +1.2 | |
1,848,348 | + | DvMF_1497 | 0.59 | -1.2 | |
1,848,493 | - | DvMF_1497 | 0.72 | -2.1 | |
1,848,875 | + | -1.2 | |||
1,849,294 | - | DvMF_1498 | 0.47 | -1.6 | |
1,849,346 | + | DvMF_1498 | 0.52 | -1.6 | |
1,849,346 | + | DvMF_1498 | 0.52 | -1.2 | |
1,849,420 | + | DvMF_1498 | 0.59 | -0.4 | |
1,849,425 | + | DvMF_1498 | 0.60 | -0.5 | |
1,849,438 | - | DvMF_1498 | 0.61 | -0.8 | |
1,849,507 | - | DvMF_1498 | 0.68 | -0.3 | |
1,849,509 | + | DvMF_1498 | 0.68 | -1.3 | |
1,849,542 | + | DvMF_1498 | 0.71 | -0.5 | |
1,849,564 | + | DvMF_1498 | 0.74 | -0.8 | |
1,849,740 | + | -0.1 |
Or see this region's nucleotide sequence