Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1302
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,591,014 | - | DvMF_1301 | 0.38 | -0.1 | |
1,591,571 | - | -0.3 | |||
1,592,161 | + | DvMF_1302 | 0.36 | -0.2 | |
1,592,203 | + | DvMF_1302 | 0.46 | -0.1 | |
1,592,261 | - | DvMF_1302 | 0.59 | -0.4 | |
1,592,302 | - | DvMF_1302 | 0.69 | +0.3 | |
1,592,318 | + | DvMF_1302 | 0.72 | -0.7 | |
1,592,375 | - | DvMF_1302 | 0.86 | -0.0 | |
1,592,453 | - | +0.0 | |||
1,592,474 | + | -0.1 | |||
1,592,492 | - | -0.1 | |||
1,592,515 | - | -0.1 | |||
1,592,727 | - | DvMF_1303 | 0.27 | -0.3 | |
1,593,090 | + | DvMF_1303 | 0.58 | +0.2 | |
1,593,132 | - | DvMF_1303 | 0.61 | -0.3 | |
1,593,147 | - | DvMF_1303 | 0.62 | -0.7 | |
1,593,346 | + | DvMF_1303 | 0.79 | -0.3 | |
1,593,383 | + | DvMF_1303 | 0.83 | -1.1 | |
1,593,383 | + | DvMF_1303 | 0.83 | -0.5 | |
1,593,391 | - | DvMF_1303 | 0.83 | -0.1 | |
1,593,391 | - | DvMF_1303 | 0.83 | +0.2 | |
1,593,391 | - | DvMF_1303 | 0.83 | -0.2 | |
1,593,391 | - | DvMF_1303 | 0.83 | -0.4 |
Or see this region's nucleotide sequence