Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0385
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 451,427 | + | greA | DvMF_0383 | 0.57 | -0.4 |
| 451,429 | - | greA | DvMF_0383 | 0.58 | -0.0 |
| 451,429 | - | greA | DvMF_0383 | 0.58 | -0.2 |
| 451,429 | - | greA | DvMF_0383 | 0.58 | +0.0 |
| 451,598 | + | +0.4 | |||
| 451,717 | + | +0.4 | |||
| 451,862 | - | -0.2 | |||
| 451,898 | + | +0.1 | |||
| 452,605 | + | DvMF_0385 | 0.53 | -1.3 | |
| 452,634 | + | DvMF_0385 | 0.60 | -0.5 | |
| 452,650 | - | DvMF_0385 | 0.64 | -0.2 | |
| 452,695 | - | DvMF_0385 | 0.74 | -0.2 | |
| 452,735 | + | DvMF_0385 | 0.84 | -1.0 | |
| 452,953 | + | -0.5 | |||
| 452,979 | + | +0.0 | |||
| 453,645 | + | -0.3 | |||
| 453,653 | - | -0.1 |
Or see this region's nucleotide sequence