Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4149
Experiment: m.b. A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
80,969 | - | Dshi_4148 | 0.18 | -3.6 | |
81,116 | - | Dshi_4148 | 0.36 | -1.3 | |
81,174 | + | Dshi_4148 | 0.42 | -3.2 | |
81,182 | - | Dshi_4148 | 0.43 | +2.4 | |
81,190 | - | Dshi_4148 | 0.44 | -3.0 | |
81,243 | + | Dshi_4148 | 0.51 | +0.3 | |
81,322 | + | Dshi_4148 | 0.60 | +1.2 | |
81,477 | + | Dshi_4148 | 0.78 | +1.0 | |
81,623 | - | -0.5 | |||
81,641 | + | -1.7 | |||
81,641 | + | +1.2 | |||
81,709 | - | +0.6 | |||
81,740 | - | -2.3 | |||
81,819 | - | -3.3 | |||
81,949 | - | +1.3 | |||
81,982 | + | +2.7 | |||
82,021 | - | Dshi_4149 | 0.13 | -3.9 | |
82,034 | + | Dshi_4149 | 0.15 | -0.5 | |
82,099 | + | Dshi_4149 | 0.24 | +0.2 | |
82,108 | - | Dshi_4149 | 0.25 | -3.2 | |
82,164 | - | Dshi_4149 | 0.33 | -4.0 | |
82,193 | + | Dshi_4149 | 0.36 | -0.0 | |
82,201 | - | Dshi_4149 | 0.38 | +1.4 | |
82,306 | - | Dshi_4149 | 0.52 | -0.2 | |
82,308 | - | Dshi_4149 | 0.52 | -1.9 | |
82,315 | + | Dshi_4149 | 0.53 | +0.2 | |
82,417 | + | Dshi_4149 | 0.67 | +0.9 | |
82,520 | + | Dshi_4149 | 0.81 | -0.9 | |
82,574 | + | Dshi_4149 | 0.89 | +1.0 | |
82,582 | - | Dshi_4149 | 0.90 | +1.4 | |
82,582 | - | Dshi_4149 | 0.90 | -1.0 | |
82,769 | - | Dshi_4150 | 0.14 | +0.3 | |
82,793 | - | Dshi_4150 | 0.17 | -0.3 | |
82,887 | - | Dshi_4150 | 0.29 | -1.4 | |
82,928 | + | Dshi_4150 | 0.34 | -1.7 | |
83,015 | + | Dshi_4150 | 0.45 | +0.7 | |
83,464 | - | +1.0 | |||
83,466 | + | -1.9 | |||
83,506 | - | -1.3 | |||
83,506 | - | -0.8 | |||
83,527 | - | +2.9 | |||
83,587 | - | -0.3 | |||
83,587 | - | -0.6 | |||
83,640 | - | -1.2 |
Or see this region's nucleotide sequence