Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3712

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
116,553	-				+0.9
116,563	-				-0.7
116,563	-				+1.5
116,563	-				-0.7
116,568	-				+0.5
116,601	+		Dshi_3711	0.10	+0.2
116,616	+		Dshi_3711	0.12	+0.3
116,616	+		Dshi_3711	0.12	-0.3
116,691	+		Dshi_3711	0.19	+2.2
116,694	-		Dshi_3711	0.19	-0.6
116,734	+		Dshi_3711	0.24	-0.5
116,867	-		Dshi_3711	0.37	-0.1
116,918	-		Dshi_3711	0.42	-1.5
116,957	+		Dshi_3711	0.46	-1.0
116,957	+		Dshi_3711	0.46	-1.0
116,966	+		Dshi_3711	0.47	+0.1
116,975	-		Dshi_3711	0.48	-0.8
116,980	+		Dshi_3711	0.49	-0.4
116,987	-		Dshi_3711	0.49	-1.1
116,988	+		Dshi_3711	0.49	+0.1
117,095	+		Dshi_3711	0.60	-0.6
117,160	-		Dshi_3711	0.67	+0.0
117,161	+		Dshi_3711	0.67	-1.2
117,164	-		Dshi_3711	0.67	-0.5
117,255	-		Dshi_3711	0.77	+2.3
117,256	+		Dshi_3711	0.77	+0.1
117,261	+		Dshi_3711	0.77	-0.8
117,269	-		Dshi_3711	0.78	-1.1
117,312	-		Dshi_3711	0.82	-0.6
117,321	-		Dshi_3711	0.83	-0.2
117,336	+		Dshi_3711	0.85	-0.1
117,358	+		Dshi_3711	0.87	-0.8
117,361	-		Dshi_3711	0.87	+1.0
117,366	-		Dshi_3711	0.88	-0.7
117,409	-				-1.3
117,432	+				+0.1
117,432	+				+0.1
117,438	+				-0.7
117,439	+				-0.6
117,441	-				-1.0
117,445	-				-1.1
117,447	-				-0.6
117,448	+				+1.9
117,489	+				-1.2
117,520	+				+0.9
117,525	+				-0.4
117,525	+				-1.4
117,525	+				-0.4
117,530	+				+0.4
117,530	+				-0.9
117,530	+				+0.2
117,530	+				-0.2
117,530	+				-1.5
117,530	+				+0.1
117,533	-				-0.2
117,533	-				+2.2
117,533	-				-0.8
117,533	-				+0.5
117,533	-				-0.2
117,538	-				-2.1
117,538	-				-2.5
117,538	-				+0.3
117,538	-				-3.0
117,538	-				-1.5
117,538	-				-0.4
117,538	-				-1.0
117,538	-				+2.2
117,538	-				-0.3
117,538	-				-1.9
117,538	-				-0.9
117,580	-				-1.2
117,602	-				+0.1
117,612	-				+2.2
117,661	-		Dshi_3712	0.18	-0.8
117,682	-		Dshi_3712	0.20	-1.8
117,707	-		Dshi_3712	0.24	-0.4
117,726	-		Dshi_3712	0.26	-0.1
117,757	-		Dshi_3712	0.30	-0.8
117,760	+		Dshi_3712	0.31	-0.5
117,779	+		Dshi_3712	0.33	+0.0
117,784	+		Dshi_3712	0.34	-1.5
117,785	+		Dshi_3712	0.34	-0.0
117,793	-		Dshi_3712	0.35	-0.7
117,815	-		Dshi_3712	0.38	-1.4
117,842	+		Dshi_3712	0.42	+0.9
117,844	+		Dshi_3712	0.42	+1.4
117,848	+		Dshi_3712	0.42	-1.3
117,857	-		Dshi_3712	0.43	-1.6
117,896	+		Dshi_3712	0.49	+0.7
117,926	-		Dshi_3712	0.53	+3.5
117,926	-		Dshi_3712	0.53	+1.1
117,933	+		Dshi_3712	0.53	-0.1
117,934	-		Dshi_3712	0.54	-1.5
117,980	-		Dshi_3712	0.60	+0.5
117,999	-		Dshi_3712	0.62	+0.3
118,007	+		Dshi_3712	0.63	-0.6
118,008	+		Dshi_3712	0.63	+0.7
118,008	+		Dshi_3712	0.63	-0.9
118,008	+		Dshi_3712	0.63	-0.5
118,008	+		Dshi_3712	0.63	-1.1
118,015	-		Dshi_3712	0.64	-1.1
118,016	-		Dshi_3712	0.64	-0.3
118,016	-		Dshi_3712	0.64	-1.5
118,016	-		Dshi_3712	0.64	-0.1
118,068	-		Dshi_3712	0.71	-1.7
118,102	+		Dshi_3712	0.76	-0.3
118,111	+		Dshi_3712	0.77	-0.3
118,125	+		Dshi_3712	0.79	-0.6
118,133	-		Dshi_3712	0.80	-0.7
118,133	-		Dshi_3712	0.80	+0.0
118,133	-		Dshi_3712	0.80	+1.9
118,135	+		Dshi_3712	0.80	-1.1
118,143	-		Dshi_3712	0.81	-0.9
118,152	+		Dshi_3712	0.82	+0.8
118,160	-		Dshi_3712	0.83	-1.4
118,196	+		Dshi_3712	0.88	-0.6
118,202	+		Dshi_3712	0.89	-0.3
118,211	+				+0.6
118,213	+				+0.9
118,216	+				-0.6
118,219	-				-0.6
118,235	+				-0.4
118,235	+				+0.6
118,235	+				+1.2
118,235	+				+0.3
118,235	+				-0.4
118,235	+				-0.5
118,235	+				-0.8
118,243	-				-1.6
118,243	-				-0.3
118,254	-				-1.0
118,256	-				-0.0
118,339	-				+0.5
118,414	-				+1.9
118,428	+				+0.6
118,436	-				-0.3
118,446	-				+0.5
118,450	-				+1.4
118,463	+				-1.2
118,463	+				+0.8
118,473	-				-1.1
118,495	-				-0.5
118,506	+				-2.1
118,549	+		Dshi_3713	0.17	-1.2
118,565	+		Dshi_3713	0.20	-0.8
118,565	+		Dshi_3713	0.20	+3.2
118,565	+		Dshi_3713	0.20	-1.5
118,572	+		Dshi_3713	0.22	-0.5
118,573	-		Dshi_3713	0.22	-0.3
118,573	-		Dshi_3713	0.22	-0.5
118,573	-		Dshi_3713	0.22	-1.6
118,614	+		Dshi_3713	0.30	-0.0
118,662	+		Dshi_3713	0.40	-1.6
118,666	+		Dshi_3713	0.41	+0.2
118,676	-		Dshi_3713	0.43	+1.2
118,704	+		Dshi_3713	0.49	+1.9
118,729	-		Dshi_3713	0.55	+0.2
118,729	-		Dshi_3713	0.55	+0.2
118,760	+		Dshi_3713	0.61	+0.8
118,768	-		Dshi_3713	0.63	-1.4
118,793	+		Dshi_3713	0.68	+1.1
118,793	+		Dshi_3713	0.68	+2.5
118,798	+		Dshi_3713	0.69	-0.5
118,816	+		Dshi_3713	0.73	-0.9
118,903	-				+0.2
118,903	-				+0.1
118,903	-				-0.7
118,910	+				-1.7
118,910	+				+2.6
119,040	+		Dshi_3714	0.19	-0.4
119,058	+		Dshi_3714	0.22	-0.9
119,099	+		Dshi_3714	0.29	+1.1
119,120	+		Dshi_3714	0.33	-0.1
119,153	+		Dshi_3714	0.38	+0.2
119,196	+		Dshi_3714	0.45	+0.1
119,218	-		Dshi_3714	0.49	-1.4
119,219	-		Dshi_3714	0.49	-2.8