Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3399

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
3,576,176	-		Dshi_3397	0.71	-2.0
3,576,178	+		Dshi_3397	0.72	-0.3
3,576,192	+		Dshi_3397	0.73	-0.9
3,576,248	-		Dshi_3397	0.78	+2.1
3,576,252	+		Dshi_3397	0.79	+1.1
3,576,271	-		Dshi_3397	0.80	+0.1
3,576,274	+		Dshi_3397	0.81	+0.1
3,576,324	-		Dshi_3397	0.85	+0.3
3,576,359	+		Dshi_3397	0.89	-0.7
3,576,364	+		Dshi_3397	0.89	-1.1
3,576,367	-		Dshi_3397	0.90	-0.4
3,576,369	+		Dshi_3397	0.90	-0.7
3,576,436	+				-0.4
3,576,437	+				+2.1
3,576,444	-				+0.7
3,577,610	+				+0.1
3,577,712	-				+1.3
3,577,722	+				-0.1
3,577,722	+				+1.3
3,577,755	-				-1.3
3,577,781	+				+2.0
3,577,781	+				+0.1
3,577,781	+				+2.9
3,577,781	+				+0.9
3,577,781	+				+0.5
3,577,781	+				+1.0
3,577,781	+				-1.6
3,577,781	+				+1.0
3,577,781	+				+1.9
3,577,781	+				-0.8
3,577,781	+				+1.7
3,577,789	-				-0.6
3,577,789	-				+0.0
3,577,789	-				-0.3
3,577,789	-				+0.3
3,577,789	-				+1.0
3,577,789	-				+1.0
3,577,789	-				-3.3
3,577,789	-				-1.0
3,577,789	-				-0.5
3,577,789	-				+0.8
3,577,791	+				+0.0
3,577,791	+				+0.8
3,577,796	+				-0.1
3,577,799	-				+0.9
3,577,818	+				-0.0
3,577,831	-				+0.3
3,577,841	-				-1.3
3,577,848	-				+0.7
3,577,885	+		Dshi_3400	0.12	-1.5
3,577,899	-		Dshi_3400	0.14	-0.1
3,577,993	-		Dshi_3400	0.28	+3.7
3,578,006	-		Dshi_3400	0.30	-0.8
3,578,041	-		Dshi_3400	0.35	-0.8
3,578,070	+		Dshi_3400	0.39	-2.8
3,578,108	+		Dshi_3400	0.44	+0.3
3,578,116	-		Dshi_3400	0.45	-0.1
3,578,118	+		Dshi_3400	0.46	+0.5
3,578,118	+		Dshi_3400	0.46	+1.3
3,578,118	+		Dshi_3400	0.46	-0.8
3,578,118	+		Dshi_3400	0.46	+0.6
3,578,126	-		Dshi_3400	0.47	-0.9
3,578,126	-		Dshi_3400	0.47	-3.1
3,578,145	+		Dshi_3400	0.50	+1.8
3,578,180	+		Dshi_3400	0.55	+0.0
3,578,180	+		Dshi_3400	0.55	+0.3
3,578,180	+		Dshi_3400	0.55	+0.7
3,578,188	-		Dshi_3400	0.56	+0.9
3,578,188	-		Dshi_3400	0.56	-0.2
3,578,193	-		Dshi_3400	0.57	-1.1
3,578,193	-				+2.7
3,578,240	+		Dshi_3400	0.63	+1.1
3,578,248	-		Dshi_3400	0.64	-0.1
3,578,317	-		Dshi_3400	0.74	-0.9
3,578,321	+		Dshi_3400	0.75	-0.1
3,578,329	-		Dshi_3400	0.76	-0.8
3,578,329	-		Dshi_3400	0.76	-0.2
3,578,357	+		Dshi_3400	0.80	+0.2
3,578,380	-		Dshi_3400	0.83	+0.6
3,578,390	-		Dshi_3400	0.85	-0.3
3,578,415	+		Dshi_3400	0.88	+0.0
3,578,423	+		Dshi_3400	0.89	+1.9
3,578,447	+				-0.3
3,578,447	+				+0.8
3,578,462	+				+0.1
3,578,470	-				-0.4
3,578,478	-				-4.0
3,578,478	-				+0.2
3,578,478	-				+0.3
3,578,478	-				-0.8
3,578,487	-				-1.5
3,578,503	+				+0.8
3,578,506	+				-0.1