Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3351

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
3,519,349	-		Dshi_3350	0.58	+2.8
3,519,411	-		Dshi_3350	0.61	+0.3
3,519,471	-		Dshi_3350	0.64	-0.3
3,519,545	+		Dshi_3350	0.68	-0.6
3,519,600	+		Dshi_3350	0.70	+1.3
3,519,602	+		Dshi_3350	0.70	-0.7
3,519,715	-		Dshi_3350	0.76	+1.9
3,519,736	-		Dshi_3350	0.77	-0.7
3,519,881	-		Dshi_3350	0.83	+0.9
3,519,970	-		Dshi_3350	0.88	+1.2
3,520,036	+				-0.3
3,520,051	+				+0.3
3,520,059	-				-0.1
3,520,120	+				+0.8
3,520,133	-				+0.9
3,520,170	+				+0.3
3,520,178	-				+0.3
3,520,200	-				-0.3
3,520,218	+				+0.4
3,520,219	-				-2.1
3,520,233	-				-1.2
3,520,245	+				-0.7
3,520,248	+				+3.6
3,520,266	+				-0.8
3,520,274	-				-3.1
3,520,275	-				+0.3
3,520,276	+				-2.5
3,520,347	+				-1.2
3,520,352	+				+0.5
3,520,355	-				+0.2
3,520,382	+				+1.1
3,520,417	+				-0.5
3,520,460	+				-0.2
3,520,470	+				-0.6
3,520,566	-		Dshi_3351	0.16	-2.5
3,520,572	+		Dshi_3351	0.16	-1.3
3,520,620	+		Dshi_3351	0.20	-0.3
3,520,655	+		Dshi_3351	0.22	-0.7
3,520,721	-		Dshi_3351	0.26	+0.7
3,520,746	+		Dshi_3351	0.28	-0.9
3,520,848	+		Dshi_3351	0.35	-0.1
3,520,967	+		Dshi_3351	0.43	-0.6
3,520,997	-		Dshi_3351	0.45	-0.7
3,521,014	+		Dshi_3351	0.46	-2.3
3,521,022	-		Dshi_3351	0.47	-0.1
3,521,057	+		Dshi_3351	0.49	-1.7
3,521,065	-		Dshi_3351	0.50	-1.3
3,521,143	+		Dshi_3351	0.55	+3.5
3,521,148	+		Dshi_3351	0.55	-1.1
3,521,156	-		Dshi_3351	0.56	-1.3
3,521,225	-		Dshi_3351	0.61	-0.2
3,521,240	-		Dshi_3351	0.62	+0.2
3,521,243	+		Dshi_3351	0.62	-2.5
3,521,348	-		Dshi_3351	0.69	+0.7
3,521,354	+		Dshi_3351	0.69	-0.5
3,521,355	-		Dshi_3351	0.69	+0.3
3,521,484	-		Dshi_3351	0.78	-0.5
3,521,522	-		Dshi_3351	0.81	-1.0
3,521,558	+		Dshi_3351	0.83	+0.3
3,521,600	-		Dshi_3351	0.86	-1.0
3,521,633	+		Dshi_3351	0.88	+1.5
3,521,715	-				-1.3
3,521,778	+				-1.4
3,521,815	+				-0.8
3,521,884	+				+1.1
3,521,924	+				-1.2
3,521,930	+				+0.3
3,521,944	+				-0.5
3,521,952	-				-0.2
3,521,964	-				-1.1
3,522,025	+				+3.9
3,522,049	-				-1.5
3,522,056	+				+3.1
3,522,056	+				+1.2
3,522,064	-				+0.1
3,522,183	+				-1.3
3,522,183	+				-1.7
3,522,191	-				-0.7
3,522,200	+				+0.3
3,522,234	+				+0.9
3,522,275	+				-2.0
3,522,288	-				+0.7
3,522,367	-				+0.3
3,522,373	+				+1.3
3,522,451	-				-1.1
3,522,516	-		Dshi_3352	0.14	-0.4
3,522,554	+		Dshi_3352	0.17	-0.3
3,522,595	+		Dshi_3352	0.21	-1.3
3,522,601	+		Dshi_3352	0.22	+0.6
3,522,651	+		Dshi_3352	0.26	+0.8
3,522,693	-		Dshi_3352	0.30	-0.8
3,522,702	+		Dshi_3352	0.31	+0.4
3,522,710	-		Dshi_3352	0.32	-2.8
3,522,710	-		Dshi_3352	0.32	-0.4
3,522,716	-		Dshi_3352	0.32	-1.1
3,522,718	+		Dshi_3352	0.33	+0.6
3,522,726	-		Dshi_3352	0.33	+0.7
3,522,726	-		Dshi_3352	0.33	-0.1
3,522,726	-		Dshi_3352	0.33	+0.3
3,522,736	+		Dshi_3352	0.34	+0.8
3,522,737	+		Dshi_3352	0.34	-1.3
3,522,787	-		Dshi_3352	0.39	-2.1