Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3219

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
3,387,175	+		Dshi_3217	0.73	+0.6
3,387,187	+		Dshi_3217	0.74	-0.4
3,387,195	-		Dshi_3217	0.75	-1.5
3,387,288	-		Dshi_3217	0.83	-0.6
3,387,415	-				-1.1
3,387,546	+		Dshi_3218	0.10	+2.9
3,387,546	+		Dshi_3218	0.10	-0.3
3,387,554	-		Dshi_3218	0.11	-1.1
3,387,576	+		Dshi_3218	0.15	+1.6
3,387,707	-		Dshi_3218	0.34	+2.6
3,387,748	+		Dshi_3218	0.40	+0.9
3,387,756	-		Dshi_3218	0.41	-1.0
3,387,756	-		Dshi_3218	0.41	+2.0
3,387,847	-		Dshi_3218	0.54	-0.0
3,387,849	-		Dshi_3218	0.54	-1.4
3,387,895	+		Dshi_3218	0.61	-0.4
3,387,903	-		Dshi_3218	0.62	-0.0
3,387,918	-		Dshi_3218	0.64	-1.4
3,387,991	-		Dshi_3218	0.75	-1.5
3,388,031	+		Dshi_3218	0.81	+2.9
3,388,078	-		Dshi_3218	0.88	+0.6
3,388,105	+				-0.4
3,388,202	-				+1.9
3,388,221	-				-0.0
3,388,221	-				+1.4
3,388,260	+		Dshi_3219	0.13	+0.0
3,388,286	-		Dshi_3219	0.16	-1.0
3,388,365	-		Dshi_3219	0.26	+0.6
3,388,445	+		Dshi_3219	0.36	-1.7
3,388,453	-		Dshi_3219	0.37	+0.6
3,388,545	+		Dshi_3219	0.49	+0.0
3,388,551	+		Dshi_3219	0.49	+0.0
3,388,635	+		Dshi_3219	0.60	-3.0
3,388,662	-		Dshi_3219	0.64	-3.1
3,388,662	-		Dshi_3219	0.64	+1.0
3,388,909	+				-0.7
3,389,012	+				-0.4
3,389,012	+				-2.2
3,389,097	+		Dshi_3220	0.16	+1.1
3,389,181	-		Dshi_3220	0.26	-0.4
3,389,189	-		Dshi_3220	0.27	+1.6
3,389,242	+		Dshi_3220	0.33	-2.4
3,389,305	-		Dshi_3220	0.40	-2.2
3,389,310	-		Dshi_3220	0.41	+3.1
3,389,322	+		Dshi_3220	0.42	+1.1
3,389,341	+		Dshi_3220	0.44	-2.0
3,389,344	+		Dshi_3220	0.44	+1.6
3,389,380	-		Dshi_3220	0.49	-1.0
3,389,393	-		Dshi_3220	0.50	+2.1
3,389,419	+		Dshi_3220	0.53	+0.6
3,389,502	+		Dshi_3220	0.62	+1.1
3,389,519	-		Dshi_3220	0.64	+0.9
3,389,600	+		Dshi_3220	0.74	+0.4
3,389,674	+		Dshi_3220	0.82	-3.2
3,389,807	+				+1.0
3,389,824	+				-1.4
3,389,829	-				+0.6