Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1963

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,061,984	-		Dshi_1962	0.82	-1.5
2,062,048	-		Dshi_1962	0.83	-0.2
2,062,157	-		Dshi_1962	0.85	-1.1
2,062,275	+		Dshi_1962	0.88	-0.3
2,062,300	-		Dshi_1962	0.88	-0.4
2,062,342	+		Dshi_1962	0.89	+1.1
2,062,357	-		Dshi_1962	0.89	-2.4
2,062,439	+				-0.0
2,062,462	-				-2.5
2,062,473	+				+0.7
2,062,663	-				-0.6
2,062,684	-				-1.4
2,062,708	-				-1.6
2,062,755	+				+0.4
2,062,795	+				-2.2
2,062,863	+				+2.0
2,062,978	-				+0.2
2,063,100	+				-1.0
2,063,118	-				-2.6
2,063,199	-				+2.0
2,063,280	+				+0.4
2,063,336	-				-0.6
2,063,382	-				-1.2
2,063,464	-				-2.8
2,063,807	+		Dshi_1963	0.12	-1.0
2,064,000	-		Dshi_1963	0.15	-1.9
2,064,000	-		Dshi_1963	0.15	+0.3
2,064,063	+		Dshi_1963	0.15	+0.8
2,064,089	-		Dshi_1963	0.16	+2.7
2,064,118	-		Dshi_1963	0.16	+1.0
2,064,392	+				+0.4
2,064,392	+		Dshi_1963	0.20	+1.0
2,064,392	+		Dshi_1963	0.20	+0.4
2,064,393	+		Dshi_1963	0.20	+0.0
2,064,447	-		Dshi_1963	0.20	-2.7
2,064,478	-		Dshi_1963	0.21	+0.4
2,065,203	-		Dshi_1963	0.30	-0.3
2,065,327	+		Dshi_1963	0.32	+0.4
2,065,473	-		Dshi_1963	0.34	+0.4
2,065,759	+		Dshi_1963	0.38	-1.5
2,065,926	+		Dshi_1963	0.40	-1.9
2,066,036	+		Dshi_1963	0.41	+0.4
2,066,190	-		Dshi_1963	0.43	+0.4
2,066,271	-		Dshi_1963	0.44	+1.4
2,066,298	+		Dshi_1963	0.45	-0.2
2,066,564	+		Dshi_1963	0.48	+1.0
2,066,565	+		Dshi_1963	0.48	-2.2
2,066,649	-		Dshi_1963	0.49	+0.6
2,066,674	+		Dshi_1963	0.50	-0.6
2,066,704	-		Dshi_1963	0.50	-1.1
2,066,861	-		Dshi_1963	0.52	+1.3
2,067,035	-		Dshi_1963	0.54	+1.3
2,067,343	-		Dshi_1963	0.58	+0.3
2,067,543	-		Dshi_1963	0.61	-2.9
2,067,606	+		Dshi_1963	0.62	-1.5
2,067,623	+		Dshi_1963	0.62	-0.6
2,067,641	-		Dshi_1963	0.62	-1.9
2,067,923	+		Dshi_1963	0.66	+0.4
2,068,024	-		Dshi_1963	0.67	-3.1
2,068,060	+		Dshi_1963	0.68	+0.4
2,068,070	+		Dshi_1963	0.68	+2.0
2,068,096	+		Dshi_1963	0.68	-1.1
2,068,211	+		Dshi_1963	0.70	-0.8
2,068,228	+		Dshi_1963	0.70	+0.4
2,068,236	-		Dshi_1963	0.70	-1.2
2,068,304	+		Dshi_1963	0.71	+0.4
2,068,352	-		Dshi_1963	0.71	-1.6
2,068,443	-		Dshi_1963	0.73	+1.0
2,068,489	+		Dshi_1963	0.73	-0.9
2,068,513	+		Dshi_1963	0.74	+0.7
2,068,522	+		Dshi_1963	0.74	-1.9
2,068,717	-		Dshi_1963	0.76	+0.4
2,068,717	-		Dshi_1963	0.76	+2.0
2,068,728	-		Dshi_1963	0.76	-2.4
2,068,745	+		Dshi_1963	0.77	-0.0
2,068,766	+		Dshi_1963	0.77	+0.4
2,068,823	+		Dshi_1963	0.78	+0.3
2,068,845	+		Dshi_1963	0.78	+0.4
2,068,893	-		Dshi_1963	0.78	-0.3
2,068,961	-		Dshi_1963	0.79	-0.8
2,068,968	+		Dshi_1963	0.79	+3.0
2,069,087	+		Dshi_1963	0.81	+0.4
2,069,310	-		Dshi_1963	0.84	-1.4
2,069,343	-		Dshi_1963	0.84	-1.9
2,069,403	-		Dshi_1963	0.85	+1.4
2,069,560	+		Dshi_1963	0.87	-0.0
2,069,733	-		Dshi_1963	0.89	-3.8
2,069,840	-				-1.8
2,069,863	-				-1.2
2,069,935	-				+1.4
2,070,201	-				-0.9
2,070,262	+				-0.6
2,070,395	-				+0.2
2,070,498	+				-0.7
2,070,552	+				+3.4
2,070,560	-				-3.2
2,070,587	+				-0.9
2,070,595	-				-0.8
2,070,600	+				-2.6
2,070,619	+				-1.8
2,070,624	+				+3.9
2,070,624	+				-1.3
2,070,624	+				+1.5
2,070,624	+				+0.4
2,070,624	+				+2.0
2,070,624	+				+1.4
2,070,624	+				+2.4
2,070,624	+				+0.4
2,070,631	+				-1.4
2,070,631	+				-1.8
2,070,632	-				+0.4
2,070,632	-				+3.0
2,070,632	-				+1.3
2,070,632	-				-0.3
2,070,632	-				+0.4
2,070,632	-				-3.3
2,070,632	-				+0.4
2,070,639	-				-0.6
2,070,639	-				+2.0
2,070,639	-				+0.4
2,070,649	-				+1.4
2,070,656	-				+2.4
2,070,657	+				-1.3
2,070,664	-				-2.2
2,070,666	-				-0.9
2,070,758	+				-0.9
2,070,823	-				-0.6
2,070,849	+				+2.4
2,070,851	+				+3.2
2,070,851	+				+0.5
2,070,854	+				-0.2
2,070,861	+				-2.1
2,070,899	+				+0.4
2,070,925	-				-0.2
2,070,940	+				-3.4
2,070,978	+				-0.6
2,070,991	+				-0.8
2,070,991	+				+2.7
2,070,991	+				-0.9
2,070,999	-				+1.4
2,070,999	-				-1.4
2,070,999	-				-1.0
2,070,999	-				-0.5
2,070,999	-				+2.4
2,071,072	+				+2.1
2,071,080	-				-0.8
2,071,095	-				+1.4
2,071,112	-				+1.1
2,071,140	+				-0.1
2,071,140	+				-0.5
2,071,140	+				-2.1
2,071,140	+				-0.9
2,071,140	+				-0.2
2,071,148	-				-1.8
2,071,148	-				+0.3
2,071,148	-				-1.2
2,071,250	-				-1.2
2,071,279	-				-2.6
2,071,279	-				+0.0
2,071,290	+		Dshi_1964	0.10	+0.6
2,071,432	+		Dshi_1964	0.18	-1.4
2,071,444	+		Dshi_1964	0.19	-0.4
2,071,531	-		Dshi_1964	0.24	-0.1