Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1436

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,490,158	+				-0.1
1,490,236	+		Dshi_1434	0.24	-1.2
1,490,307	+		Dshi_1434	0.57	+0.5
1,490,408	-				+0.1
1,490,434	-				-2.6
1,490,501	+		Dshi_1435	0.16	+2.8
1,490,509	-		Dshi_1435	0.17	+0.2
1,490,538	+		Dshi_1435	0.21	+1.7
1,490,556	-		Dshi_1435	0.23	-1.1
1,490,601	-		Dshi_1435	0.29	+0.2
1,490,897	-		Dshi_1435	0.67	+0.6
1,490,922	+		Dshi_1435	0.71	-0.2
1,491,030	-		Dshi_1435	0.85	-0.1
1,491,151	-				+1.0
1,491,190	+				+1.0
1,491,198	-				-0.8
1,491,203	-				+0.2
1,491,278	-				+0.3
1,491,438	-		Dshi_1436	0.19	-2.0
1,491,447	+		Dshi_1436	0.20	-0.8
1,491,457	+		Dshi_1436	0.20	+1.3
1,491,520	-		Dshi_1436	0.24	+1.6
1,491,571	-		Dshi_1436	0.28	+1.2
1,491,602	+		Dshi_1436	0.30	-0.4
1,491,776	-		Dshi_1436	0.41	+0.6
1,491,778	+		Dshi_1436	0.41	+1.7
1,491,792	-		Dshi_1436	0.42	-1.0
1,491,840	+		Dshi_1436	0.45	-2.6
1,491,848	-		Dshi_1436	0.46	-0.1
1,491,850	+		Dshi_1436	0.46	-2.8
1,491,931	+		Dshi_1436	0.51	-0.2
1,491,976	-		Dshi_1436	0.54	-2.1
1,492,033	+		Dshi_1436	0.58	-0.1
1,492,217	+		Dshi_1436	0.70	-0.0
1,492,312	-		Dshi_1436	0.76	+0.1
1,492,341	+		Dshi_1436	0.78	+0.5
1,492,349	-		Dshi_1436	0.78	+2.3
1,492,349	-		Dshi_1436	0.78	-1.4
1,492,415	+		Dshi_1436	0.82	+0.9
1,492,450	+		Dshi_1436	0.85	-0.5
1,492,630	+				-1.9
1,492,638	-				+0.8
1,492,707	-				+0.6
1,492,731	+				-1.2
1,492,912	+		Dshi_1437	0.22	-0.6
1,492,934	-		Dshi_1437	0.24	-0.2
1,492,969	+		Dshi_1437	0.27	-1.6
1,492,979	+		Dshi_1437	0.28	+3.4
1,493,010	-		Dshi_1437	0.31	-0.6
1,493,058	+		Dshi_1437	0.36	+0.0
1,493,206	+		Dshi_1437	0.50	+0.8
1,493,255	+		Dshi_1437	0.54	-0.8
1,493,360	+		Dshi_1437	0.64	-0.7
1,493,529	-		Dshi_1437	0.80	+0.6
1,493,579	+		Dshi_1437	0.85	+0.4
1,493,601	+		Dshi_1437	0.87	-0.3
1,493,631	-		Dshi_1437	0.90	-0.9
1,493,645	+				-0.3
1,493,660	-				+0.6
1,493,663	+				-0.7