Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1211
Experiment: m.b. A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,249,019 | - | -0.2 | |||
1,249,433 | - | Dshi_1210 | 0.49 | -0.4 | |
1,249,543 | + | Dshi_1210 | 0.62 | -1.5 | |
1,249,660 | - | Dshi_1210 | 0.76 | -0.2 | |
1,249,660 | - | Dshi_1210 | 0.76 | -0.5 | |
1,249,707 | - | Dshi_1210 | 0.81 | +0.2 | |
1,249,833 | - | +0.0 | |||
1,249,866 | + | -2.2 | |||
1,249,893 | + | -1.4 | |||
1,249,963 | - | Dshi_1211 | 0.17 | -3.1 | |
1,250,001 | - | Dshi_1211 | 0.25 | -1.2 | |
1,250,066 | - | Dshi_1211 | 0.38 | +0.8 | |
1,250,082 | + | Dshi_1211 | 0.41 | -1.5 | |
1,250,090 | - | Dshi_1211 | 0.43 | -1.4 | |
1,250,280 | + | Dshi_1211 | 0.82 | -0.4 | |
1,250,418 | + | -0.9 | |||
1,250,418 | + | -3.6 | |||
1,250,426 | - | +0.0 | |||
1,250,532 | + | +1.1 | |||
1,250,536 | + | -3.0 | |||
1,250,626 | - | Dshi_1212 | 0.11 | +1.8 | |
1,250,712 | - | Dshi_1212 | 0.14 | +0.8 | |
1,250,755 | + | Dshi_1212 | 0.16 | -1.5 | |
1,250,773 | - | Dshi_1212 | 0.17 | -2.0 | |
1,251,041 | + | Dshi_1212 | 0.28 | -0.8 | |
1,251,043 | - | Dshi_1212 | 0.28 | -2.1 | |
1,251,268 | + | Dshi_1212 | 0.37 | -0.9 |
Or see this region's nucleotide sequence