Experiment: m.b. A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0264 and Dshi_0265 are separated by 294 nucleotides Dshi_0265 and Dshi_0266 are separated by 72 nucleotides Dshi_0266 and Dshi_0267 are separated by 136 nucleotides
Dshi_0264: Dshi_0264 - hypothetical protein (RefSeq), at 260,484 to 261,542
_0264
Dshi_0265: Dshi_0265 - ribosomal protein L10 (RefSeq), at 261,837 to 262,355
_0265
Dshi_0266: Dshi_0266 - ribosomal protein L7/L12 (RefSeq), at 262,428 to 262,808
_0266
Dshi_0267: Dshi_0267 - hypothetical protein (RefSeq), at 262,945 to 264,294
_0267
Position (kb)
262
263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 261.507 kb on - strand at 261.507 kb on - strand at 261.568 kb on - strand at 261.568 kb on - strand at 261.568 kb on - strand at 262.879 kb on + strand at 262.902 kb on + strand at 262.902 kb on + strand at 262.966 kb on - strand at 262.968 kb on + strand at 263.002 kb on + strand at 263.018 kb on - strand at 263.021 kb on + strand at 263.033 kb on + strand at 263.072 kb on + strand at 263.128 kb on + strand, within Dshi_0267 at 263.128 kb on + strand, within Dshi_0267 at 263.136 kb on - strand, within Dshi_0267 at 263.181 kb on + strand, within Dshi_0267 at 263.230 kb on - strand, within Dshi_0267 at 263.232 kb on + strand, within Dshi_0267 at 263.265 kb on + strand, within Dshi_0267 at 263.349 kb on - strand, within Dshi_0267 at 263.396 kb on + strand, within Dshi_0267 at 263.404 kb on - strand, within Dshi_0267 at 263.406 kb on + strand, within Dshi_0267 at 263.457 kb on + strand, within Dshi_0267 at 263.503 kb on - strand, within Dshi_0267 at 263.645 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.767 kb on - strand, within Dshi_0267
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.02 mg/ml remove 261,507 - +0.5 261,507 - +1.5 261,568 - -0.2 261,568 - +0.9 261,568 - +2.5 262,879 + -0.5 262,902 + -0.8 262,902 + -0.2 262,966 - +0.2 262,968 + +0.3 263,002 + -1.8 263,018 - -1.1 263,021 + +0.0 263,033 + -0.9 263,072 + +0.5 263,128 + Dshi_0267 0.14 -1.1 263,128 + Dshi_0267 0.14 +2.5 263,136 - Dshi_0267 0.14 -1.3 263,181 + Dshi_0267 0.17 -0.5 263,230 - Dshi_0267 0.21 +0.2 263,232 + Dshi_0267 0.21 +2.1 263,265 + Dshi_0267 0.24 -2.1 263,349 - Dshi_0267 0.30 +0.3 263,396 + Dshi_0267 0.33 -0.5 263,404 - Dshi_0267 0.34 +1.2 263,406 + Dshi_0267 0.34 -0.1 263,457 + Dshi_0267 0.38 +1.5 263,503 - Dshi_0267 0.41 +1.0 263,645 + Dshi_0267 0.52 -0.3 263,759 + Dshi_0267 0.60 +0.5 263,759 + Dshi_0267 0.60 +0.8 263,759 + Dshi_0267 0.60 -1.8 263,767 - Dshi_0267 0.61 -0.7
Or see this region's nucleotide sequence