Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2945
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,716,300 | + | DvMF_2944 | 0.41 | -0.4 | |
3,716,528 | + | DvMF_2944 | 0.62 | -0.1 | |
3,716,617 | + | DvMF_2944 | 0.70 | -0.5 | |
3,716,618 | + | DvMF_2944 | 0.70 | -0.3 | |
3,716,618 | + | DvMF_2944 | 0.70 | -0.0 | |
3,716,675 | + | DvMF_2944 | 0.75 | +0.4 | |
3,716,745 | + | DvMF_2944 | 0.82 | -0.0 | |
3,716,824 | - | DvMF_2944 | 0.89 | +0.8 | |
3,716,839 | - | -0.3 | |||
3,717,074 | - | -0.0 | |||
3,717,106 | + | -1.9 | |||
3,717,357 | + | DvMF_2945 | 0.53 | -0.9 | |
3,717,357 | + | DvMF_2945 | 0.53 | -0.5 | |
3,717,417 | - | DvMF_2945 | 0.65 | -0.6 | |
3,717,424 | + | DvMF_2945 | 0.66 | -0.2 | |
3,717,458 | + | DvMF_2945 | 0.73 | -0.3 | |
3,717,603 | + | -0.3 | |||
3,718,037 | + | DvMF_2946 | 0.28 | -0.2 | |
3,718,041 | - | DvMF_2946 | 0.29 | -0.6 | |
3,718,184 | + | DvMF_2946 | 0.42 | -0.7 | |
3,718,308 | - | DvMF_2946 | 0.54 | -0.3 | |
3,718,328 | - | DvMF_2946 | 0.56 | -0.2 |
Or see this region's nucleotide sequence