Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2119 and DvMF_2120 are separated by 469 nucleotides DvMF_2120 and DvMF_2121 are separated by 295 nucleotides DvMF_2121 and DvMF_2122 are separated by 345 nucleotides
DvMF_2119: DvMF_2119 - hypothetical protein (RefSeq), at 2,637,174 to 2,637,842
_2119
DvMF_2120: DvMF_2120 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 2,638,312 to 2,638,500
_2120
DvMF_2121: DvMF_2121 - 2-alkenal reductase (RefSeq), at 2,638,796 to 2,640,373
_2121
DvMF_2122: DvMF_2122 - nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (RefSeq), at 2,640,719 to 2,641,798
_2122
Position (kb)
2638
2639
2640
2641 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2637.959 kb on - strand at 2638.145 kb on + strand at 2638.846 kb on + strand at 2638.880 kb on + strand at 2638.981 kb on + strand, within DvMF_2121 at 2638.994 kb on - strand, within DvMF_2121 at 2639.040 kb on + strand, within DvMF_2121 at 2639.046 kb on - strand, within DvMF_2121 at 2639.104 kb on + strand, within DvMF_2121 at 2639.145 kb on - strand, within DvMF_2121 at 2639.237 kb on + strand, within DvMF_2121 at 2639.375 kb on - strand, within DvMF_2121 at 2639.449 kb on - strand, within DvMF_2121 at 2639.533 kb on - strand, within DvMF_2121 at 2639.848 kb on - strand, within DvMF_2121 at 2639.858 kb on - strand, within DvMF_2121 at 2639.907 kb on + strand, within DvMF_2121 at 2640.097 kb on + strand, within DvMF_2121 at 2640.150 kb on - strand, within DvMF_2121 at 2640.188 kb on - strand, within DvMF_2121 at 2640.204 kb on + strand, within DvMF_2121 at 2640.368 kb on + strand at 2640.368 kb on + strand at 2640.381 kb on + strand at 2640.674 kb on + strand at 2640.787 kb on - strand at 2641.300 kb on - strand, within DvMF_2122 at 2641.305 kb on - strand, within DvMF_2122
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with G418 0.125 mg/ml remove 2,637,959 - -0.6 2,638,145 + +0.1 2,638,846 + -0.2 2,638,880 + -0.3 2,638,981 + DvMF_2121 0.12 -0.2 2,638,994 - DvMF_2121 0.13 -0.2 2,639,040 + DvMF_2121 0.15 -0.4 2,639,046 - DvMF_2121 0.16 -0.3 2,639,104 + DvMF_2121 0.20 -0.3 2,639,145 - DvMF_2121 0.22 -0.2 2,639,237 + DvMF_2121 0.28 -0.5 2,639,375 - DvMF_2121 0.37 -0.1 2,639,449 - DvMF_2121 0.41 -0.4 2,639,533 - DvMF_2121 0.47 -0.3 2,639,848 - DvMF_2121 0.67 +0.3 2,639,858 - DvMF_2121 0.67 +0.1 2,639,907 + DvMF_2121 0.70 -0.2 2,640,097 + DvMF_2121 0.82 +0.0 2,640,150 - DvMF_2121 0.86 +0.0 2,640,188 - DvMF_2121 0.88 -0.5 2,640,204 + DvMF_2121 0.89 +0.1 2,640,368 + -0.5 2,640,368 + -0.5 2,640,381 + +0.1 2,640,674 + -0.0 2,640,787 - -1.2 2,641,300 - DvMF_2122 0.54 -4.8 2,641,305 - DvMF_2122 0.54 -3.9
Or see this region's nucleotide sequence