Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1996 and DvMF_1997 are separated by 350 nucleotides DvMF_1997 and DvMF_1998 are separated by 118 nucleotides DvMF_1998 and DvMF_1999 overlap by 8 nucleotides
DvMF_1996: DvMF_1996 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,473,689 to 2,475,722
_1996
DvMF_1997: DvMF_1997 - hypothetical protein (RefSeq), at 2,476,073 to 2,477,323
_1997
DvMF_1998: DvMF_1998 - hypothetical protein (RefSeq), at 2,477,442 to 2,477,903
_1998
DvMF_1999: DvMF_1999 - protein of unknown function DUF112 transmembrane (RefSeq), at 2,477,896 to 2,479,440
_1999
Position (kb)
2476
2477
2478 Strain fitness (log2 ratio)
-1
0
1 at 2475.195 kb on + strand, within DvMF_1996 at 2475.728 kb on - strand at 2475.751 kb on + strand at 2475.761 kb on - strand at 2475.906 kb on + strand at 2475.909 kb on - strand at 2475.914 kb on - strand at 2476.143 kb on + strand at 2476.351 kb on + strand, within DvMF_1997 at 2476.423 kb on + strand, within DvMF_1997 at 2476.428 kb on + strand, within DvMF_1997 at 2476.433 kb on + strand, within DvMF_1997 at 2476.621 kb on - strand, within DvMF_1997 at 2476.683 kb on + strand, within DvMF_1997 at 2476.691 kb on - strand, within DvMF_1997 at 2476.849 kb on - strand, within DvMF_1997 at 2476.881 kb on - strand, within DvMF_1997 at 2477.276 kb on - strand at 2477.295 kb on - strand at 2477.420 kb on + strand at 2477.579 kb on - strand, within DvMF_1998 at 2477.603 kb on + strand, within DvMF_1998 at 2477.682 kb on + strand, within DvMF_1998 at 2477.749 kb on - strand, within DvMF_1998 at 2477.749 kb on - strand, within DvMF_1998 at 2477.764 kb on - strand, within DvMF_1998 at 2477.815 kb on - strand, within DvMF_1998 at 2477.923 kb on - strand at 2478.274 kb on + strand, within DvMF_1999
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with G418 0.125 mg/ml remove 2,475,195 + DvMF_1996 0.74 -0.5 2,475,728 - -0.1 2,475,751 + +0.0 2,475,761 - -0.3 2,475,906 + -0.4 2,475,909 - -0.9 2,475,914 - -1.0 2,476,143 + -0.3 2,476,351 + DvMF_1997 0.22 -0.1 2,476,423 + DvMF_1997 0.28 -0.5 2,476,428 + DvMF_1997 0.28 +0.4 2,476,433 + DvMF_1997 0.29 -0.9 2,476,621 - DvMF_1997 0.44 -0.8 2,476,683 + DvMF_1997 0.49 -0.6 2,476,691 - DvMF_1997 0.49 -0.2 2,476,849 - DvMF_1997 0.62 -0.0 2,476,881 - DvMF_1997 0.65 -0.7 2,477,276 - -0.2 2,477,295 - -0.4 2,477,420 + -0.5 2,477,579 - DvMF_1998 0.30 -0.5 2,477,603 + DvMF_1998 0.35 -0.5 2,477,682 + DvMF_1998 0.52 -0.8 2,477,749 - DvMF_1998 0.66 -0.3 2,477,749 - DvMF_1998 0.66 -0.6 2,477,764 - DvMF_1998 0.70 +0.5 2,477,815 - DvMF_1998 0.81 -0.3 2,477,923 - -0.8 2,478,274 + DvMF_1999 0.24 -0.3
Or see this region's nucleotide sequence