Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1568
Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with G418 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,934,082 | - | DvMF_1567 | 0.45 | -0.1 | |
1,934,149 | + | DvMF_1567 | 0.50 | -1.1 | |
1,934,439 | - | DvMF_1567 | 0.70 | +0.1 | |
1,934,444 | - | DvMF_1567 | 0.70 | -0.1 | |
1,934,445 | - | DvMF_1567 | 0.70 | -0.3 | |
1,934,711 | + | DvMF_1567 | 0.89 | -0.3 | |
1,934,727 | + | -0.2 | |||
1,934,756 | - | +0.2 | |||
1,935,359 | - | DvMF_1568 | 0.58 | +0.2 | |
1,935,371 | - | DvMF_1568 | 0.59 | +0.1 | |
1,935,510 | - | DvMF_1568 | 0.80 | +0.3 | |
1,935,795 | + | DvMF_1569 | 0.19 | -0.2 | |
1,935,799 | - | DvMF_1569 | 0.20 | -0.6 | |
1,935,799 | - | DvMF_1569 | 0.20 | -0.2 | |
1,936,314 | - | DvMF_1569 | 0.85 | -0.0 | |
1,936,319 | - | DvMF_1569 | 0.86 | -0.6 | |
1,936,494 | + | +0.8 | |||
1,936,509 | - | DvMF_1570 | 0.10 | +0.1 | |
1,936,510 | - | DvMF_1570 | 0.10 | +0.0 | |
1,936,510 | - | DvMF_1570 | 0.10 | +0.1 | |
1,936,554 | - | DvMF_1570 | 0.17 | -0.4 | |
1,936,565 | + | DvMF_1570 | 0.18 | -0.8 | |
1,936,642 | + | DvMF_1570 | 0.30 | -0.3 |
Or see this region's nucleotide sequence