Experiment: MoYLS4 with G418 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1414 and DvMF_1415 are separated by 154 nucleotides DvMF_1415 and DvMF_1416 are separated by 24 nucleotides DvMF_1416 and DvMF_1417 are separated by 51 nucleotides DvMF_1417 and DvMF_1418 are separated by 61 nucleotides
DvMF_1414: DvMF_1414 - Phosphoglycerate mutase (RefSeq), at 1,728,361 to 1,729,626
_1414
DvMF_1415: DvMF_1415 - hypothetical protein (RefSeq), at 1,729,781 to 1,730,092
_1415
DvMF_1416: DvMF_1416 - hypothetical protein (RefSeq), at 1,730,117 to 1,730,554
_1416
DvMF_1417: DvMF_1417 - heavy metal translocating P-type ATPase (RefSeq), at 1,730,606 to 1,733,521
_1417
DvMF_1418: DvMF_1418 - hypothetical protein (RefSeq), at 1,733,583 to 1,733,864
_1418
Position (kb)
1730
1731
1732
1733
1734 Strain fitness (log2 ratio)
-1
0
1 at 1729.990 kb on + strand, within DvMF_1415 at 1730.094 kb on - strand at 1730.184 kb on + strand, within DvMF_1416 at 1730.499 kb on - strand, within DvMF_1416 at 1730.514 kb on + strand at 1730.698 kb on - strand at 1730.755 kb on - strand at 1731.011 kb on + strand, within DvMF_1417 at 1731.177 kb on - strand, within DvMF_1417 at 1731.185 kb on + strand, within DvMF_1417 at 1731.270 kb on - strand, within DvMF_1417 at 1731.322 kb on + strand, within DvMF_1417 at 1731.705 kb on + strand, within DvMF_1417 at 1731.744 kb on + strand, within DvMF_1417 at 1732.128 kb on + strand, within DvMF_1417 at 1732.203 kb on + strand, within DvMF_1417 at 1732.340 kb on + strand, within DvMF_1417 at 1732.340 kb on + strand, within DvMF_1417 at 1732.373 kb on + strand, within DvMF_1417 at 1732.474 kb on + strand, within DvMF_1417 at 1732.647 kb on + strand, within DvMF_1417 at 1732.655 kb on - strand, within DvMF_1417 at 1732.792 kb on - strand, within DvMF_1417 at 1732.807 kb on + strand, within DvMF_1417 at 1732.951 kb on + strand, within DvMF_1417 at 1732.975 kb on - strand, within DvMF_1417 at 1733.047 kb on - strand, within DvMF_1417 at 1733.206 kb on + strand, within DvMF_1417 at 1733.352 kb on + strand at 1733.576 kb on + strand at 1733.616 kb on - strand, within DvMF_1418 at 1733.643 kb on - strand, within DvMF_1418 at 1733.963 kb on + strand at 1734.364 kb on + strand at 1734.388 kb on - strand at 1734.474 kb on + strand at 1734.504 kb on - strand at 1734.511 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with G418 0.125 mg/ml remove 1,729,990 + DvMF_1415 0.67 -0.8 1,730,094 - -0.6 1,730,184 + DvMF_1416 0.15 -0.1 1,730,499 - DvMF_1416 0.87 -0.3 1,730,514 + -0.3 1,730,698 - -0.4 1,730,755 - -0.8 1,731,011 + DvMF_1417 0.14 -0.1 1,731,177 - DvMF_1417 0.20 -1.1 1,731,185 + DvMF_1417 0.20 -0.5 1,731,270 - DvMF_1417 0.23 -0.6 1,731,322 + DvMF_1417 0.25 -0.3 1,731,705 + DvMF_1417 0.38 -1.7 1,731,744 + DvMF_1417 0.39 -0.5 1,732,128 + DvMF_1417 0.52 -0.5 1,732,203 + DvMF_1417 0.55 -0.3 1,732,340 + DvMF_1417 0.59 -0.5 1,732,340 + DvMF_1417 0.59 +1.4 1,732,373 + DvMF_1417 0.61 +0.0 1,732,474 + DvMF_1417 0.64 -0.3 1,732,647 + DvMF_1417 0.70 -0.2 1,732,655 - DvMF_1417 0.70 +0.2 1,732,792 - DvMF_1417 0.75 -0.5 1,732,807 + DvMF_1417 0.75 -0.4 1,732,951 + DvMF_1417 0.80 -0.4 1,732,975 - DvMF_1417 0.81 -0.6 1,733,047 - DvMF_1417 0.84 -0.8 1,733,206 + DvMF_1417 0.89 +0.2 1,733,352 + -0.3 1,733,576 + -0.1 1,733,616 - DvMF_1418 0.12 -0.6 1,733,643 - DvMF_1418 0.21 +0.3 1,733,963 + -0.5 1,734,364 + -0.4 1,734,388 - -0.2 1,734,474 + -0.6 1,734,504 - -0.9 1,734,511 - -0.2
Or see this region's nucleotide sequence