Strain Fitness in Shewanella amazonensis SB2B around Sama_2663

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
3,186,179	-				-0.8
3,186,179	-				+0.3
3,186,205	-				+0.3
3,186,220	+				+0.7
3,186,220	+				+1.3
3,186,220	+				-0.8
3,186,220	+				+0.6
3,186,220	+				-0.4
3,186,221	-				-1.6
3,186,247	+				+0.6
3,186,286	+				+0.3
3,186,286	+				+0.7
3,186,288	+				-0.8
3,186,288	+				-0.8
3,186,288	+				+0.1
3,186,289	-				-0.6
3,186,289	-				-0.1
3,186,289	-				-1.0
3,186,292	+				-0.4
3,186,292	+				-0.3
3,186,292	+				+0.5
3,186,292	+				+0.3
3,186,292	+				+0.7
3,186,292	+				-0.3
3,186,292	+				+1.3
3,186,292	+				+0.1
3,186,292	+				+0.1
3,186,292	+				+0.5
3,186,292	+				+0.7
3,186,292	+				+0.5
3,186,292	+				-1.6
3,186,292	+				+0.2
3,186,292	+				-0.1
3,186,293	-				+0.5
3,186,293	-				+0.6
3,186,293	-				+0.5
3,186,293	-				+0.7
3,186,293	-				+0.5
3,186,293	-				+0.0
3,186,293	-				-0.3
3,186,293	-				+0.9
3,186,293	-				-0.1
3,186,293	-				+0.5
3,186,293	-				-0.4
3,186,293	-				-0.9
3,186,324	+				-0.6
3,186,423	+		Sama_2662	0.14	+0.3
3,186,424	-		Sama_2662	0.14	+0.5
3,186,483	+		Sama_2662	0.21	+0.6
3,186,484	-		Sama_2662	0.21	-1.3
3,186,484	-		Sama_2662	0.21	-2.7
3,186,484	-		Sama_2662	0.21	+0.1
3,186,484	-		Sama_2662	0.21	+0.9
3,186,484	-		Sama_2662	0.21	-2.8
3,186,488	-		Sama_2662	0.21	+0.1
3,186,493	+		Sama_2662	0.22	-0.2
3,186,494	-		Sama_2662	0.22	+0.3
3,186,504	-		Sama_2662	0.23	-0.4
3,186,603	+		Sama_2662	0.34	+1.3
3,186,687	+		Sama_2662	0.43	+0.7
3,186,715	+		Sama_2662	0.46	-0.3
3,186,725	+		Sama_2662	0.47	+0.1
3,186,726	-		Sama_2662	0.47	+1.0
3,186,766	+		Sama_2662	0.51	+0.2
3,186,900	-		Sama_2662	0.66	-0.3
3,186,954	+		Sama_2662	0.72	-0.2
3,186,954	+		Sama_2662	0.72	+0.7
3,186,954	+		Sama_2662	0.72	-0.8
3,186,954	+		Sama_2662	0.72	+0.5
3,186,954	+		Sama_2662	0.72	+0.2
3,186,954	+		Sama_2662	0.72	-0.5
3,186,954	+		Sama_2662	0.72	-1.8
3,186,954	+		Sama_2662	0.72	+0.7
3,186,954	+		Sama_2662	0.72	-1.1
3,186,954	+		Sama_2662	0.72	+0.3
3,186,954	+		Sama_2662	0.72	+0.9
3,186,955	-		Sama_2662	0.72	-0.6
3,186,955	-		Sama_2662	0.72	+0.1
3,186,955	-		Sama_2662	0.72	+0.9
3,186,956	+		Sama_2662	0.72	+0.1
3,186,956	+		Sama_2662	0.72	-0.5
3,186,956	+		Sama_2662	0.72	+0.3
3,186,956	+		Sama_2662	0.72	-2.1
3,186,956	+		Sama_2662	0.72	-0.6
3,186,956	+		Sama_2662	0.72	-0.7
3,186,956	+		Sama_2662	0.72	+0.8
3,186,957	-		Sama_2662	0.72	-0.6
3,186,957	-		Sama_2662	0.72	+2.3
3,186,957	-		Sama_2662	0.72	+0.7
3,186,957	-		Sama_2662	0.72	+0.5
3,186,957	-		Sama_2662	0.72	+0.6
3,186,957	-		Sama_2662	0.72	+1.5
3,186,957	-		Sama_2662	0.72	-1.0
3,186,957	-		Sama_2662	0.72	-0.6
3,186,957	-		Sama_2662	0.72	-0.3
3,186,957	-		Sama_2662	0.72	-0.7
3,186,957	-		Sama_2662	0.72	-0.1
3,186,958	+		Sama_2662	0.72	+0.2
3,186,958	+		Sama_2662	0.72	+0.2
3,186,958	+		Sama_2662	0.72	+0.6
3,186,958	+		Sama_2662	0.72	-0.3
3,186,958	+		Sama_2662	0.72	-0.0
3,186,958	+		Sama_2662	0.72	-0.3
3,186,959	-		Sama_2662	0.72	+0.4
3,186,959	-		Sama_2662	0.72	+0.7
3,186,959	-		Sama_2662	0.72	-1.6
3,186,959	-		Sama_2662	0.72	+0.9
3,186,959	-		Sama_2662	0.72	-0.4
3,186,959	-		Sama_2662	0.72	+0.2
3,186,959	-		Sama_2662	0.72	-2.1
3,186,959	-		Sama_2662	0.72	-1.3
3,187,021	-		Sama_2662	0.79	-2.2
3,187,033	+		Sama_2662	0.80	-0.3
3,187,051	+		Sama_2662	0.82	+0.4
3,187,051	+		Sama_2662	0.82	+0.1
3,187,052	-		Sama_2662	0.82	-0.6
3,187,052	-		Sama_2662	0.82	-0.8
3,187,052	-		Sama_2662	0.82	+1.1
3,187,052	-		Sama_2662	0.82	+0.3
3,187,052	-		Sama_2662	0.82	-0.6
3,187,060	-		Sama_2662	0.83	-0.8
3,187,060	-		Sama_2662	0.83	+0.6
3,187,060	-		Sama_2662	0.83	-0.3
3,187,149	+				+0.1
3,187,149	+				-0.1
3,187,158	-				-0.6
3,187,158	-				-0.6
3,187,158	-				-2.2
3,187,158	-				-0.1
3,187,214	+				-1.3
3,187,218	+				-0.8
3,187,219	-				-0.6
3,187,219	-				-1.5
3,187,319	+				-4.1
3,187,320	-				-2.6
3,187,342	+				-1.8
3,187,343	-				-2.2
3,187,358	-				-1.3
3,187,358	-				-1.0
3,187,358	-				-2.1
3,187,396	-				-2.3
3,187,396	-				-0.7
3,187,412	-				-0.1
3,187,412	-				-0.4
3,187,448	+		Sama_2663	0.10	-1.3
3,187,448	+		Sama_2663	0.10	-2.7
3,187,449	-		Sama_2663	0.10	-1.3
3,187,449	-		Sama_2663	0.10	-1.6
3,187,458	+		Sama_2663	0.10	-1.1
3,187,459	-		Sama_2663	0.10	-3.2
3,187,468	-		Sama_2663	0.11	-2.6
3,187,588	+		Sama_2663	0.15	-1.8
3,187,589	-		Sama_2663	0.15	-0.8
3,187,594	-		Sama_2663	0.15	-1.7
3,187,710	-		Sama_2663	0.19	-1.6
3,187,710	-		Sama_2663	0.19	-4.5
3,187,784	+		Sama_2663	0.22	-3.4
3,187,784	+		Sama_2663	0.22	-2.0
3,187,784	+		Sama_2663	0.22	-1.7
3,187,785	-		Sama_2663	0.22	-2.8
3,187,785	-		Sama_2663	0.22	-2.2
3,187,785	-		Sama_2663	0.22	-0.8
3,187,785	-		Sama_2663	0.22	-1.8
3,187,785	-		Sama_2663	0.22	-3.8
3,187,785	-		Sama_2663	0.22	-0.8
3,187,848	-		Sama_2663	0.24	-2.5
3,187,901	+		Sama_2663	0.26	-1.3
3,187,902	-		Sama_2663	0.26	-3.0
3,188,109	+		Sama_2663	0.33	-0.3
3,188,109	+		Sama_2663	0.33	-2.3
3,188,109	+		Sama_2663	0.33	-2.7
3,188,116	+		Sama_2663	0.33	-1.6
3,188,116	+		Sama_2663	0.33	-2.5
3,188,117	-		Sama_2663	0.33	-2.8
3,188,149	+		Sama_2663	0.34	-2.6
3,188,150	-		Sama_2663	0.34	-3.3
3,188,150	-		Sama_2663	0.34	-2.1
3,188,150	-		Sama_2663	0.34	-2.3
3,188,225	+		Sama_2663	0.37	-1.6
3,188,225	+		Sama_2663	0.37	-3.6
3,188,226	-		Sama_2663	0.37	-3.6
3,188,246	+		Sama_2663	0.38	-2.6
3,188,246	+		Sama_2663	0.38	-2.3
3,188,247	-		Sama_2663	0.38	-2.3
3,188,270	+		Sama_2663	0.39	+0.7
3,188,270	+		Sama_2663	0.39	-1.5
3,188,271	-		Sama_2663	0.39	-1.6
3,188,392	+		Sama_2663	0.43	-1.3
3,188,392	+		Sama_2663	0.43	-3.3
3,188,392	+		Sama_2663	0.43	-0.8
3,188,393	-		Sama_2663	0.43	-0.5
3,188,393	-		Sama_2663	0.43	-3.5
3,188,393	-		Sama_2663	0.43	-2.3
3,188,393	-		Sama_2663	0.43	-1.6
3,188,393	-		Sama_2663	0.43	-4.6
3,188,405	+		Sama_2663	0.43	-2.0
3,188,405	+		Sama_2663	0.43	-1.1
3,188,405	+		Sama_2663	0.43	-2.9
3,188,405	+		Sama_2663	0.43	-2.1
3,188,406	-		Sama_2663	0.43	-3.3
3,188,406	-		Sama_2663	0.43	-2.4
3,188,406	-		Sama_2663	0.43	-2.3
3,188,406	-		Sama_2663	0.43	-1.2
3,188,422	+		Sama_2663	0.44	-2.7
3,188,423	-		Sama_2663	0.44	-1.8
3,188,467	+		Sama_2663	0.45	-1.3
3,188,467	+		Sama_2663	0.45	-3.2
3,188,574	+		Sama_2663	0.49	-1.8
3,188,575	-		Sama_2663	0.49	-1.3
3,188,575	-		Sama_2663	0.49	-1.7
3,188,604	+		Sama_2663	0.50	-2.7
3,188,642	-		Sama_2663	0.51	-2.7
3,188,891	+		Sama_2663	0.60	-0.8
3,188,891	+		Sama_2663	0.60	-1.7
3,188,891	+		Sama_2663	0.60	-3.2
3,188,892	-		Sama_2663	0.60	-2.0
3,188,892	-		Sama_2663	0.60	-1.8
3,188,892	-		Sama_2663	0.60	-1.8
3,188,892	-		Sama_2663	0.60	+0.3
3,188,892	-		Sama_2663	0.60	-1.6
3,188,892	-		Sama_2663	0.60	-2.6
3,188,892	-		Sama_2663	0.60	-2.3
3,188,892	-		Sama_2663	0.60	-1.7
3,188,911	+		Sama_2663	0.61	-1.0
3,188,911	+		Sama_2663	0.61	-1.5
3,188,911	+		Sama_2663	0.61	-0.3
3,188,912	-		Sama_2663	0.61	-2.6
3,188,922	-		Sama_2663	0.61	-1.6
3,188,922	-		Sama_2663	0.61	-0.6
3,188,922	-		Sama_2663	0.61	-2.2
3,188,922	-		Sama_2663	0.61	-2.4
3,188,942	+		Sama_2663	0.62	-1.7
3,188,942	+		Sama_2663	0.62	-2.4
3,188,942	+		Sama_2663	0.62	+1.7
3,188,943	-		Sama_2663	0.62	-3.1
3,189,105	+		Sama_2663	0.68	-2.1
3,189,105	+		Sama_2663	0.68	-1.8
3,189,106	-		Sama_2663	0.68	-2.7
3,189,106	-		Sama_2663	0.68	-2.1
3,189,152	+		Sama_2663	0.69	-3.3
3,189,152	+		Sama_2663	0.69	-1.1
3,189,152	+		Sama_2663	0.69	-2.9
3,189,153	-		Sama_2663	0.69	-0.8
3,189,153	-		Sama_2663	0.69	-0.7
3,189,153	-		Sama_2663	0.69	-2.1
3,189,153	-		Sama_2663	0.69	-1.1
3,189,201	-		Sama_2663	0.71	-1.8
3,189,231	+		Sama_2663	0.72	+0.2
3,189,242	+		Sama_2663	0.72	-2.4
3,189,242	+		Sama_2663	0.72	-2.4
3,189,243	-		Sama_2663	0.72	-2.8
3,189,243	-		Sama_2663	0.72	-1.4
3,189,243	-		Sama_2663	0.72	-1.1
3,189,243	-		Sama_2663	0.72	-2.3
3,189,244	-		Sama_2663	0.72	-2.4
3,189,272	+		Sama_2663	0.73	+0.0
3,189,273	-		Sama_2663	0.73	-1.9
3,189,273	-		Sama_2663	0.73	-1.7
3,189,275	+		Sama_2663	0.73	-2.8
3,189,275	+		Sama_2663	0.73	-0.3
3,189,275	+		Sama_2663	0.73	-3.7
3,189,275	+		Sama_2663	0.73	-3.1
3,189,276	-		Sama_2663	0.73	-1.0
3,189,276	-		Sama_2663	0.73	-1.3
3,189,276	-		Sama_2663	0.73	-0.7
3,189,276	-		Sama_2663	0.73	-3.2
3,189,276	-		Sama_2663	0.73	+0.7
3,189,276	-		Sama_2663	0.73	-1.5
3,189,276	-		Sama_2663	0.73	-2.3
3,189,276	-		Sama_2663	0.73	-1.9
3,189,276	-		Sama_2663	0.73	+0.0
3,189,276	-		Sama_2663	0.73	-1.3
3,189,475	-		Sama_2663	0.80	+0.7
3,189,625	-		Sama_2663	0.86	-0.3
3,189,627	+		Sama_2663	0.86	-1.1
3,189,627	+		Sama_2663	0.86	-4.3
3,189,628	-		Sama_2663	0.86	-1.6
3,189,690	+		Sama_2663	0.88	-2.2
3,189,852	+				-1.3
3,189,853	-				-1.8
3,189,886	-				-0.3
3,190,041	+				-1.0
3,190,041	+				-0.4
3,190,041	+				+0.0
3,190,042	-				+1.7
3,190,042	-				+0.2
3,190,070	+				+0.4
3,190,070	+				-1.8
3,190,070	+				-0.8
3,190,070	+				+0.4
3,190,071	-				-0.1
3,190,073	+				-1.2
3,190,074	-				+1.6
3,190,074	-				+0.2
3,190,089	+				-0.6
3,190,089	+				+1.4
3,190,089	+				+0.0
3,190,089	+				+1.0
3,190,090	-				-0.4
3,190,090	-				-0.6
3,190,090	-				+0.7
3,190,090	-				-2.1
3,190,090	-				+0.7
3,190,090	-				-0.2
3,190,090	-				-0.3
3,190,090	-				-0.1
3,190,090	-				+0.1
3,190,090	-				-0.1
3,190,090	-				-0.3
3,190,090	-				-0.3
3,190,093	+				-0.3
3,190,094	-				+0.3
3,190,094	-				-1.0
3,190,148	+				-1.6
3,190,148	+				-0.6
3,190,148	+				-0.5
3,190,148	+				+0.5
3,190,148	+				-0.2
3,190,149	-				-0.2
3,190,149	-				+2.3
3,190,151	+				-0.5
3,190,151	+				+1.2
3,190,151	+				-0.3
3,190,151	+				-0.7
3,190,151	+				+0.2
3,190,152	-				+0.0
3,190,152	-				+0.8
3,190,152	-				+0.0
3,190,152	-				+0.9
3,190,153	+				-0.3
3,190,154	-				+0.1
3,190,154	-				+0.6
3,190,154	-				-0.7
3,190,154	-				+1.3
3,190,173	-				+0.6
3,190,188	-				+0.3
3,190,190	+				-0.1
3,190,207	-				-0.3
3,190,271	+				+0.2
3,190,357	-		Sama_2664	0.10	+0.3
3,190,357	-		Sama_2664	0.10	+0.7
3,190,372	+		Sama_2664	0.12	-0.3
3,190,372	+		Sama_2664	0.12	+0.3
3,190,372	+		Sama_2664	0.12	-0.5
3,190,372	+		Sama_2664	0.12	+0.9
3,190,372	+		Sama_2664	0.12	-2.3
3,190,373	-		Sama_2664	0.12	-1.3
3,190,373	-		Sama_2664	0.12	+0.0
3,190,373	-		Sama_2664	0.12	-0.7
3,190,395	+		Sama_2664	0.14	+0.2
3,190,396	-		Sama_2664	0.14	-0.8
3,190,401	+		Sama_2664	0.15	-0.1
3,190,402	-		Sama_2664	0.15	+0.1
3,190,413	+		Sama_2664	0.16	+0.8
3,190,413	+		Sama_2664	0.16	+0.7
3,190,413	+		Sama_2664	0.16	+0.1
3,190,413	+		Sama_2664	0.16	-0.5
3,190,413	+		Sama_2664	0.16	+0.6
3,190,414	-		Sama_2664	0.16	+0.7
3,190,414	-		Sama_2664	0.16	-2.1
3,190,493	+		Sama_2664	0.24	-0.3
3,190,494	-		Sama_2664	0.24	-0.4
3,190,494	-		Sama_2664	0.24	+0.3
3,190,543	+		Sama_2664	0.29	+0.4
3,190,634	-		Sama_2664	0.38	-0.3
3,190,650	+		Sama_2664	0.40	-0.3
3,190,650	+		Sama_2664	0.40	-0.4
3,190,650	+		Sama_2664	0.40	+0.3
3,190,650	+		Sama_2664	0.40	-1.1
3,190,651	-		Sama_2664	0.40	+2.0
3,190,651	-		Sama_2664	0.40	-0.1
3,190,657	+		Sama_2664	0.41	+0.1
3,190,658	-		Sama_2664	0.41	-0.3
3,190,658	-		Sama_2664	0.41	+0.1
3,190,659	+		Sama_2664	0.41	+0.6
3,190,659	+		Sama_2664	0.41	-2.3
3,190,659	+		Sama_2664	0.41	+1.5
3,190,660	-		Sama_2664	0.41	+1.5
3,190,807	+		Sama_2664	0.56	-0.4
3,190,807	+		Sama_2664	0.56	-0.1
3,190,808	-		Sama_2664	0.56	-0.3
3,190,864	+		Sama_2664	0.62	-0.1
3,190,864	+		Sama_2664	0.62	-0.5
3,190,864	+		Sama_2664	0.62	-1.3
3,190,864	+		Sama_2664	0.62	-1.6
3,190,864	+		Sama_2664	0.62	+1.0
3,190,864	+		Sama_2664	0.62	+0.8
3,190,864	+		Sama_2664	0.62	-0.5
3,190,864	+		Sama_2664	0.62	-0.7
3,190,864	+		Sama_2664	0.62	+0.0
3,190,864	+		Sama_2664	0.62	+0.0
3,190,864	+		Sama_2664	0.62	+0.5
3,190,864	+		Sama_2664	0.62	+0.7
3,190,865	-		Sama_2664	0.62	-0.1
3,190,865	-		Sama_2664	0.62	+0.1
3,190,865	-		Sama_2664	0.62	-0.7
3,190,865	-		Sama_2664	0.62	-0.0
3,190,865	-		Sama_2664	0.62	-0.0
3,190,865	-		Sama_2664	0.62	+0.2
3,190,865	-		Sama_2664	0.62	+0.3
3,190,865	-		Sama_2664	0.62	-0.1
3,190,865	-		Sama_2664	0.62	-0.5
3,190,865	-		Sama_2664	0.62	-0.4
3,190,865	-		Sama_2664	0.62	+1.0
3,190,865	-		Sama_2664	0.62	+1.2
3,190,865	-		Sama_2664	0.62	+1.2
3,190,865	-		Sama_2664	0.62	-0.1
3,190,901	-		Sama_2664	0.66	-0.9
3,190,903	+		Sama_2664	0.66	-0.3
3,190,903	+		Sama_2664	0.66	-0.3
3,190,903	+		Sama_2664	0.66	-0.6
3,190,908	+		Sama_2664	0.66	-0.8
3,190,930	+		Sama_2664	0.69	-0.3
3,190,931	-		Sama_2664	0.69	-0.8
3,190,931	-		Sama_2664	0.69	-0.3
3,190,931	-		Sama_2664	0.69	+2.0
3,190,936	+		Sama_2664	0.69	+0.2
3,190,936	+		Sama_2664	0.69	-0.4
3,190,936	+		Sama_2664	0.69	-0.1
3,190,936	+		Sama_2664	0.69	+2.3
3,190,936	+		Sama_2664	0.69	-1.1
3,190,937	-		Sama_2664	0.69	+0.1
3,190,937	-		Sama_2664	0.69	+0.7
3,190,937	-		Sama_2664	0.69	-0.9
3,190,937	-		Sama_2664	0.69	-0.2
3,190,937	-		Sama_2664	0.69	-0.7
3,190,937	-		Sama_2664	0.69	-0.2
3,190,937	-		Sama_2664	0.69	-0.8
3,190,937	-		Sama_2664	0.69	-0.1
3,190,937	-		Sama_2664	0.69	-0.4
3,190,937	-		Sama_2664	0.69	+0.2
3,190,937	-		Sama_2664	0.69	-0.4
3,190,940	-		Sama_2664	0.70	-0.4
3,190,940	-		Sama_2664	0.70	-1.8
3,190,940	-		Sama_2664	0.70	+0.3
3,190,940	-		Sama_2664	0.70	-0.0
3,190,940	-		Sama_2664	0.70	-0.1