Strain Fitness in Shewanella amazonensis SB2B around Sama_2469

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
2,973,790	+		Sama_2467	0.83	+1.1
2,973,851	-				+0.6
2,973,851	-				+0.4
2,973,877	+				-0.6
2,973,878	-				+0.4
2,973,878	-				-1.2
2,973,886	+				-0.6
2,973,886	+				-0.1
2,973,887	-				+1.6
2,973,941	-				-0.4
2,973,968	+				+0.8
2,973,968	+				+0.6
2,974,006	+				+1.8
2,974,007	-				+0.4
2,974,007	-				-2.0
2,974,031	-				+0.5
2,974,031	-				-0.5
2,974,085	+				+1.1
2,974,086	-				-1.7
2,974,086	-				+1.1
2,974,086	-				-1.1
2,974,086	-				+3.0
2,974,087	+				+0.0
2,974,087	+				+0.7
2,974,088	-				-0.4
2,974,099	+				-0.1
2,974,099	+				+0.6
2,974,099	+				+0.6
2,974,099	+				+1.5
2,974,100	-				-1.4
2,974,100	-				-0.4
2,974,114	-				+1.2
2,974,114	-				+0.1
2,974,116	+				-0.2
2,974,117	-				-0.5
2,974,183	+		Sama_2468	0.14	+0.4
2,974,183	+		Sama_2468	0.14	+0.1
2,974,183	+		Sama_2468	0.14	+0.6
2,974,184	-		Sama_2468	0.14	-1.7
2,974,184	-		Sama_2468	0.14	-0.2
2,974,184	-		Sama_2468	0.14	+0.3
2,974,184	-		Sama_2468	0.14	-0.0
2,974,184	-		Sama_2468	0.14	+0.5
2,974,187	-		Sama_2468	0.15	+0.1
2,974,320	+		Sama_2468	0.39	-1.0
2,974,320	+		Sama_2468	0.39	-2.3
2,974,320	+		Sama_2468	0.39	+0.6
2,974,321	-		Sama_2468	0.39	+0.0
2,974,321	-		Sama_2468	0.39	+0.2
2,974,321	-		Sama_2468	0.39	-0.4
2,974,321	-		Sama_2468	0.39	-0.4
2,974,347	+		Sama_2468	0.44	-1.4
2,974,347	+		Sama_2468	0.44	-0.8
2,974,347	+		Sama_2468	0.44	-1.0
2,974,347	+		Sama_2468	0.44	-0.7
2,974,348	-		Sama_2468	0.45	-0.7
2,974,348	-		Sama_2468	0.45	+1.2
2,974,348	-		Sama_2468	0.45	-0.7
2,974,348	-		Sama_2468	0.45	+0.3
2,974,362	-		Sama_2468	0.47	-0.7
2,974,431	+		Sama_2468	0.60	+0.8
2,974,431	+		Sama_2468	0.60	-0.8
2,974,432	-		Sama_2468	0.60	+0.6
2,974,432	-		Sama_2468	0.60	+0.0
2,974,432	-		Sama_2468	0.60	+0.4
2,974,432	-		Sama_2468	0.60	+1.1
2,974,432	-		Sama_2468	0.60	-0.4
2,974,432	-		Sama_2468	0.60	+0.3
2,974,436	+		Sama_2468	0.61	-1.1
2,974,436	+		Sama_2468	0.61	+0.2
2,974,437	-		Sama_2468	0.61	-0.4
2,974,437	-		Sama_2468	0.61	+0.4
2,974,437	-		Sama_2468	0.61	+0.6
2,974,444	+		Sama_2468	0.62	+0.3
2,974,448	-		Sama_2468	0.63	+0.5
2,974,448	-		Sama_2468	0.63	-2.2
2,974,448	-		Sama_2468	0.63	+1.3
2,974,448	-		Sama_2468	0.63	-0.8
2,974,455	+		Sama_2468	0.64	+0.1
2,974,455	+		Sama_2468	0.64	-0.2
2,974,456	-		Sama_2468	0.65	+0.6
2,974,456	-		Sama_2468	0.65	-1.4
2,974,465	+		Sama_2468	0.66	+0.1
2,974,466	-		Sama_2468	0.66	+0.2
2,974,466	-		Sama_2468	0.66	-2.0
2,974,525	-		Sama_2468	0.77	+0.5
2,974,535	-		Sama_2468	0.79	-0.1
2,974,587	+		Sama_2468	0.89	-0.5
2,974,588	-		Sama_2468	0.89	-0.5
2,974,594	+				+0.3
2,974,594	+				-1.3
2,974,594	+				-0.3
2,974,595	-				-0.2
2,974,650	+				+1.5
2,974,704	-				-1.1
2,974,730	+				-1.0
2,974,734	-				+1.0
2,974,740	-				-1.1
2,974,740	-				+0.5
2,974,745	+				+0.9
2,974,745	+				-1.3
2,974,745	+				-0.6
2,974,745	+				+0.3
2,974,746	-				+1.5
2,974,827	+		Sama_2469	0.15	+0.6
2,974,827	+		Sama_2469	0.15	+0.3
2,974,828	-		Sama_2469	0.15	+1.0
2,974,828	-		Sama_2469	0.15	-0.1
2,974,828	-		Sama_2469	0.15	+1.1
2,974,841	-		Sama_2469	0.17	-0.6
2,974,841	-		Sama_2469	0.17	+0.6
2,974,868	-		Sama_2469	0.22	-1.4
2,974,876	-		Sama_2469	0.24	+0.4
2,974,876	-		Sama_2469	0.24	-0.1
2,974,885	-		Sama_2469	0.25	+0.6
2,974,887	+		Sama_2469	0.25	+0.8
2,974,895	-		Sama_2469	0.27	+0.4
2,974,905	+		Sama_2469	0.29	+1.2
2,974,905	+		Sama_2469	0.29	-0.2
2,974,905	+		Sama_2469	0.29	+2.0
2,974,905	+		Sama_2469	0.29	+0.1
2,974,906	-		Sama_2469	0.29	+0.6
2,974,906	-		Sama_2469	0.29	-0.0
2,974,906	-		Sama_2469	0.29	+0.8
2,974,906	-		Sama_2469	0.29	+0.4
2,974,906	-		Sama_2469	0.29	-1.1
2,974,906	-		Sama_2469	0.29	+0.5
2,974,906	-		Sama_2469	0.29	+0.9
2,974,923	-		Sama_2469	0.32	-1.0
2,974,983	-		Sama_2469	0.43	+0.9
2,974,991	+		Sama_2469	0.44	-2.7
2,974,991	+		Sama_2469	0.44	+0.8
2,974,992	-		Sama_2469	0.44	-0.5
2,974,992	-		Sama_2469	0.44	+0.9
2,974,992	-		Sama_2469	0.44	+0.2
2,974,992	-		Sama_2469	0.44	+0.1
2,974,997	+		Sama_2469	0.45	+0.6
2,974,997	+		Sama_2469	0.45	+0.6
2,974,997	+		Sama_2469	0.45	-1.2
2,974,997	+		Sama_2469	0.45	+0.9
2,974,997	+		Sama_2469	0.45	-0.4
2,974,998	-		Sama_2469	0.45	+0.6
2,974,998	-		Sama_2469	0.45	-0.5
2,974,998	-		Sama_2469	0.45	-1.2
2,974,998	-		Sama_2469	0.45	-0.3
2,974,998	-		Sama_2469	0.45	-1.4
2,974,998	-		Sama_2469	0.45	+1.0
2,974,998	-		Sama_2469	0.45	+0.1
2,974,998	-		Sama_2469	0.45	+0.5
2,974,998	-		Sama_2469	0.45	+0.5
2,974,998	-		Sama_2469	0.45	+0.0
2,975,014	-		Sama_2469	0.48	+0.9
2,975,031	+		Sama_2469	0.51	+0.3
2,975,049	-		Sama_2469	0.54	+0.4
2,975,049	-		Sama_2469	0.54	+0.3
2,975,049	-		Sama_2469	0.54	+0.5
2,975,049	-		Sama_2469	0.54	+0.2
2,975,085	+		Sama_2469	0.61	+0.6
2,975,085	+		Sama_2469	0.61	+1.0
2,975,085	+		Sama_2469	0.61	+0.1
2,975,085	+		Sama_2469	0.61	-0.2
2,975,086	-		Sama_2469	0.61	+1.2
2,975,086	-		Sama_2469	0.61	-1.8
2,975,160	-		Sama_2469	0.74	+0.6
2,975,195	+		Sama_2469	0.80	-0.4
2,975,196	-		Sama_2469	0.81	-0.4
2,975,196	-		Sama_2469	0.81	+1.1
2,975,212	-		Sama_2469	0.83	+0.4
2,975,212	-		Sama_2469	0.83	-0.2
2,975,250	+				-0.7
2,975,290	+				+0.4
2,975,290	+				+0.6
2,975,291	-				+0.2
2,975,291	-				-0.3
2,975,291	-				-0.7
2,975,291	-				+0.0
2,975,291	-				-0.2
2,975,291	-				+2.2
2,975,291	-				+0.6
2,975,292	+				-1.2
2,975,349	-				+0.5
2,975,349	-				-0.2
2,975,349	-				+0.2
2,975,349	-				+1.0
2,975,371	-				+0.6
2,975,371	-				-0.2
2,975,371	-				+0.8
2,975,371	-				-0.7
2,975,389	+				+0.2
2,975,390	-				-2.4
2,975,495	+				+0.0
2,975,495	+				+0.1
2,975,496	-				+0.1
2,975,499	+				-0.1
2,975,499	+				+0.1
2,975,500	-				-0.5
2,975,500	-				-0.4
2,975,500	-				-0.7
2,975,534	+		Sama_2470	0.12	+0.8
2,975,535	-		Sama_2470	0.12	+0.6
2,975,619	+		Sama_2470	0.37	-1.5
2,975,619	+		Sama_2470	0.37	+0.2
2,975,641	+		Sama_2470	0.44	+0.3
2,975,641	+		Sama_2470	0.44	-0.7
2,975,641	+		Sama_2470	0.44	+1.2
2,975,641	+		Sama_2470	0.44	-1.1
2,975,666	+		Sama_2470	0.52	+0.3
2,975,666	+		Sama_2470	0.52	+0.3
2,975,667	-		Sama_2470	0.52	-0.4
2,975,696	+		Sama_2470	0.61	+1.0
2,975,697	-		Sama_2470	0.61	+0.6
2,975,697	-		Sama_2470	0.61	-0.2
2,975,732	+		Sama_2470	0.72	+0.1
2,975,733	-		Sama_2470	0.72	+1.4
2,975,737	+		Sama_2470	0.73	-0.2
2,975,737	+		Sama_2470	0.73	+1.6
2,975,737	+		Sama_2470	0.73	+1.4
2,975,737	+		Sama_2470	0.73	-0.4
2,975,747	+		Sama_2470	0.76	+0.4
2,975,765	-		Sama_2470	0.82	+1.1
2,975,765	-		Sama_2470	0.82	+0.0
2,975,816	+				-0.4
2,975,817	-				-0.0
2,975,853	-				-0.4
2,975,886	+				+0.6
2,975,886	+				-0.5
2,975,886	+				+1.2
2,975,886	+				+0.5
2,975,886	+				+0.2
2,975,886	+				-0.8
2,975,886	+				+1.6
2,975,886	+				-0.5
2,975,886	+				-0.2
2,975,886	+				-0.3
2,975,886	+				-0.7
2,975,887	-				-0.6
2,975,887	-				+0.8
2,975,887	-				-1.0
2,975,887	-				-0.8
2,975,887	-				+0.6
2,975,887	-				-0.7
2,975,887	-				+0.1
2,975,887	-				-0.6
2,975,887	-				+0.1
2,975,887	-				+0.3
2,975,887	-				+0.2
2,975,887	-				-0.7
2,975,888	+				+1.0
2,975,888	+				+0.6
2,975,888	+				-0.0
2,975,889	-				-1.0
2,975,889	-				+1.5
2,975,938	+				-0.5
2,975,939	-				-0.7
2,975,958	+				-0.3
2,975,958	+				+0.6
2,975,958	+				-1.0
2,975,958	+				+0.9
2,975,959	-				-1.2
2,975,959	-				-0.1
2,975,959	-				-0.6
2,975,961	+				-0.8
2,975,961	+				+0.4
2,975,961	+				-1.1
2,975,961	+				-0.2
2,975,962	-				-0.9
2,975,962	-				-0.9
2,975,969	+				-1.7
2,975,969	+				-0.3
2,975,970	-				+0.6
2,975,980	+		Sama_2471	0.12	-0.4
2,976,058	+		Sama_2471	0.36	-0.8
2,976,141	+		Sama_2471	0.61	-0.6
2,976,141	+		Sama_2471	0.61	+0.6
2,976,141	+		Sama_2471	0.61	-2.0
2,976,244	+				+0.2