Strain Fitness in Shewanella amazonensis SB2B around Sama_2336

Experiment: Tween 20

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20
2,800,746	+				-1.7
2,800,746	+				-1.5
2,800,747	-				-0.7
2,800,747	-				-0.4
2,800,762	+				-1.0
2,800,762	+				-1.2
2,800,818	+		Sama_2335	0.15	-2.0
2,800,827	+		Sama_2335	0.16	-1.4
2,800,827	+		Sama_2335	0.16	-1.7
2,800,827	+		Sama_2335	0.16	-3.0
2,800,828	-		Sama_2335	0.16	-0.4
2,800,854	+		Sama_2335	0.19	+0.0
2,800,933	+		Sama_2335	0.26	-0.1
2,800,933	+		Sama_2335	0.26	-1.1
2,800,934	-		Sama_2335	0.26	-2.7
2,800,941	+		Sama_2335	0.27	-1.6
2,801,005	+		Sama_2335	0.33	-1.1
2,801,005	+		Sama_2335	0.33	-2.4
2,801,005	+		Sama_2335	0.33	-0.7
2,801,005	+		Sama_2335	0.33	-3.3
2,801,005	+		Sama_2335	0.33	-3.0
2,801,005	+		Sama_2335	0.33	+0.0
2,801,005	+		Sama_2335	0.33	-2.6
2,801,006	-		Sama_2335	0.33	-1.7
2,801,006	-		Sama_2335	0.33	-2.2
2,801,010	-		Sama_2335	0.33	-1.0
2,801,092	+		Sama_2335	0.41	-1.3
2,801,093	-		Sama_2335	0.41	-0.6
2,801,098	-		Sama_2335	0.42	-1.6
2,801,129	-		Sama_2335	0.44	-0.4
2,801,162	+		Sama_2335	0.48	-3.7
2,801,167	-		Sama_2335	0.48	-0.6
2,801,167	-		Sama_2335	0.48	-2.2
2,801,240	+		Sama_2335	0.55	-0.4
2,801,240	+		Sama_2335	0.55	-1.9
2,801,241	-		Sama_2335	0.55	-0.4
2,801,340	+		Sama_2335	0.64	-1.0
2,801,340	+		Sama_2335	0.64	-3.0
2,801,340	+		Sama_2335	0.64	-1.9
2,801,341	-		Sama_2335	0.64	-2.9
2,801,420	+		Sama_2335	0.72	-1.1
2,801,426	+		Sama_2335	0.73	+0.9
2,801,438	+		Sama_2335	0.74	-2.4
2,801,494	-		Sama_2335	0.79	-1.0
2,801,523	-		Sama_2335	0.82	-2.3
2,801,523	-		Sama_2335	0.82	-2.2
2,801,529	+		Sama_2335	0.82	+0.3
2,801,541	+		Sama_2335	0.83	-1.7
2,801,543	+		Sama_2335	0.84	-1.2
2,801,545	+		Sama_2335	0.84	-1.0
2,801,546	-		Sama_2335	0.84	-0.8
2,801,571	+		Sama_2335	0.86	-1.0
2,801,571	+		Sama_2335	0.86	-2.7
2,801,571	+		Sama_2335	0.86	-1.5
2,801,571	+		Sama_2335	0.86	-1.2
2,801,571	+		Sama_2335	0.86	-2.1
2,801,571	+		Sama_2335	0.86	-2.2
2,801,571	+		Sama_2335	0.86	-2.3
2,801,572	-		Sama_2335	0.86	-1.7
2,801,575	+		Sama_2335	0.87	-1.6
2,801,575	+		Sama_2335	0.87	-1.5
2,801,576	-		Sama_2335	0.87	-1.0
2,801,576	-		Sama_2335	0.87	-1.8
2,801,586	+		Sama_2335	0.88	-3.0
2,801,632	+				-1.8
2,801,788	-		Sama_2336	0.10	-0.4
2,801,788	-		Sama_2336	0.10	-3.2
2,801,796	-		Sama_2336	0.11	-1.0
2,801,799	+		Sama_2336	0.12	+0.6
2,801,829	+		Sama_2336	0.16	-2.0
2,801,865	-		Sama_2336	0.21	-2.2
2,801,899	+		Sama_2336	0.26	-1.4
2,801,912	+		Sama_2336	0.28	-2.1
2,801,913	-		Sama_2336	0.28	-0.4
2,801,984	+		Sama_2336	0.38	-3.2
2,801,984	+		Sama_2336	0.38	-1.6
2,801,985	-		Sama_2336	0.38	-1.4
2,801,985	-		Sama_2336	0.38	-1.0
2,801,986	+		Sama_2336	0.39	+0.0
2,801,987	-		Sama_2336	0.39	-0.3
2,801,988	+		Sama_2336	0.39	-1.0
2,801,989	-		Sama_2336	0.39	-1.0
2,801,989	-		Sama_2336	0.39	-1.4
2,801,989	-		Sama_2336	0.39	-1.6
2,801,989	-		Sama_2336	0.39	-4.0
2,801,989	-		Sama_2336	0.39	-1.4
2,801,989	-		Sama_2336	0.39	-2.9
2,801,989	-		Sama_2336	0.39	-1.4
2,801,993	+		Sama_2336	0.40	+0.6
2,802,001	+		Sama_2336	0.41	-1.9
2,802,001	+		Sama_2336	0.41	-1.2
2,802,001	+		Sama_2336	0.41	-1.7
2,802,002	-		Sama_2336	0.41	-0.3
2,802,002	-		Sama_2336	0.41	-1.7
2,802,002	-		Sama_2336	0.41	-3.3
2,802,009	+		Sama_2336	0.42	-2.7
2,802,009	+		Sama_2336	0.42	-2.0
2,802,010	-		Sama_2336	0.42	-1.7
2,802,014	-		Sama_2336	0.43	-2.6
2,802,014	-		Sama_2336	0.43	-1.9
2,802,068	+		Sama_2336	0.50	-2.6
2,802,068	+		Sama_2336	0.50	-1.7
2,802,068	+		Sama_2336	0.50	-2.6
2,802,069	-		Sama_2336	0.51	-2.7
2,802,069	-		Sama_2336	0.51	-2.2
2,802,069	-		Sama_2336	0.51	-2.2
2,802,069	-		Sama_2336	0.51	-1.0
2,802,069	-		Sama_2336	0.51	-2.4
2,802,069	-		Sama_2336	0.51	-2.7
2,802,157	-		Sama_2336	0.63	-0.4
2,802,157	-		Sama_2336	0.63	-2.7
2,802,157	-		Sama_2336	0.63	-1.9
2,802,298	-		Sama_2336	0.83	-2.7
2,802,322	+		Sama_2336	0.87	-1.4
2,802,323	-		Sama_2336	0.87	-1.4
2,802,323	-		Sama_2336	0.87	-2.1
2,802,394	-				+0.8
2,802,454	-				+0.1
2,802,490	+				+0.6
2,802,512	-				+1.2
2,802,545	-				+0.9
2,802,586	-				+1.3
2,802,591	-				+0.3
2,802,603	+				+2.5
2,802,604	-				+0.5
2,802,663	+				-0.3
2,802,664	-				-0.2
2,802,664	-				+0.8
2,802,666	+				-0.4
2,802,666	+				+0.3
2,802,666	+				-0.1
2,802,667	-				+1.1
2,802,667	-				+1.6
2,802,667	-				+0.0
2,802,720	+				+0.5
2,802,728	+				-0.4
2,802,729	-				+0.6
2,802,729	-				-0.6
2,802,742	-				+1.6
2,802,747	+				+0.4
2,802,748	-				-0.4
2,802,748	-				+1.6
2,802,748	-				+0.6
2,802,748	-				-2.0
2,802,748	-				-0.1
2,802,748	-				-0.7
2,802,748	-				-0.4
2,802,748	-				-0.1
2,802,748	-				+0.0
2,802,879	+				-2.0
2,802,880	-				-0.6
2,802,900	-				-1.7
2,802,979	-				-0.4
2,802,985	+				-1.7
2,802,986	-				-3.4
2,802,989	-				-0.4
2,803,018	-				-2.0
2,803,021	+				-3.0
2,803,021	+				-1.0
2,803,022	-				-1.9
2,803,096	+		Sama_2337	0.11	-0.4
2,803,103	-		Sama_2337	0.11	-2.9
2,803,127	-		Sama_2337	0.12	-1.0
2,803,176	-		Sama_2337	0.14	-1.1
2,803,186	-		Sama_2337	0.15	-2.4
2,803,190	+		Sama_2337	0.15	-2.4
2,803,212	+		Sama_2337	0.16	-3.4
2,803,233	+		Sama_2337	0.17	+0.0
2,803,239	+		Sama_2337	0.17	-1.7
2,803,239	+		Sama_2337	0.17	-2.0
2,803,240	-		Sama_2337	0.17	-1.0
2,803,240	-		Sama_2337	0.17	-3.0
2,803,251	+		Sama_2337	0.17	-1.5
2,803,251	+		Sama_2337	0.17	-2.0
2,803,252	-		Sama_2337	0.17	-1.7
2,803,282	+		Sama_2337	0.19	-1.5
2,803,372	+		Sama_2337	0.22	-2.9