Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4157 and Dshi_4158 are separated by 78 nucleotides Dshi_4158 and Dshi_4159 are separated by 121 nucleotides
Dshi_4157: Dshi_4157 - monooxygenase protein, putative (RefSeq), at 3,833 to 5,632
_4157
Dshi_4158: Dshi_4158 - acetoin reductase (RefSeq), at 5,711 to 6,484
_4158
Dshi_4159: Dshi_4159 - Alcohol dehydrogenase GroES domain protein (RefSeq), at 6,606 to 7,658
_4159
Position (kb) 5
6
7 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4.754 kb on + strand, within Dshi_4157 at 4.762 kb on - strand, within Dshi_4157 at 4.765 kb on + strand, within Dshi_4157 at 4.783 kb on - strand, within Dshi_4157 at 4.884 kb on - strand, within Dshi_4157 at 4.952 kb on + strand at 4.974 kb on + strand, within Dshi_4157 at 5.157 kb on + strand, within Dshi_4157 at 5.165 kb on - strand, within Dshi_4157 at 5.253 kb on + strand, within Dshi_4157 at 5.386 kb on + strand, within Dshi_4157 at 5.410 kb on + strand, within Dshi_4157 at 5.433 kb on + strand, within Dshi_4157 at 5.722 kb on + strand at 5.722 kb on + strand at 5.730 kb on - strand at 5.934 kb on + strand, within Dshi_4158 at 6.023 kb on + strand, within Dshi_4158 at 6.064 kb on - strand, within Dshi_4158 at 6.330 kb on - strand, within Dshi_4158 at 6.571 kb on - strand at 6.586 kb on + strand at 6.689 kb on + strand at 7.129 kb on + strand, within Dshi_4159 at 7.147 kb on - strand, within Dshi_4159
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 4,754 + Dshi_4157 0.51 -0.9 4,762 - Dshi_4157 0.52 +1.6 4,765 + Dshi_4157 0.52 +0.6 4,783 - Dshi_4157 0.53 -1.9 4,884 - Dshi_4157 0.58 -0.2 4,952 + -1.5 4,974 + Dshi_4157 0.63 +0.5 5,157 + Dshi_4157 0.74 +2.1 5,165 - Dshi_4157 0.74 -1.5 5,253 + Dshi_4157 0.79 -0.5 5,386 + Dshi_4157 0.86 -1.6 5,410 + Dshi_4157 0.88 -0.7 5,433 + Dshi_4157 0.89 -2.2 5,722 + +0.8 5,722 + -1.3 5,730 - +0.8 5,934 + Dshi_4158 0.29 -1.8 6,023 + Dshi_4158 0.40 -0.2 6,064 - Dshi_4158 0.46 -0.0 6,330 - Dshi_4158 0.80 -0.6 6,571 - -0.2 6,586 + -1.2 6,689 + -0.5 7,129 + Dshi_4159 0.50 -0.0 7,147 - Dshi_4159 0.51 +2.4
Or see this region's nucleotide sequence