Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4129 and Dshi_4130 are separated by 395 nucleotides
Dshi_4129: Dshi_4129 - polysaccharide biosynthesis protein (RefSeq), at 60,514 to 61,947
_4129
Dshi_4130: Dshi_4130 - Parallel beta-helix repeat (RefSeq), at 62,343 to 64,739
_4130
Position (kb) 62
63
64
65 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 61.344 kb on - strand, within Dshi_4129 at 61.393 kb on - strand, within Dshi_4129 at 61.411 kb on + strand, within Dshi_4129 at 61.477 kb on + strand, within Dshi_4129 at 61.511 kb on + strand, within Dshi_4129 at 61.609 kb on - strand, within Dshi_4129 at 61.609 kb on - strand, within Dshi_4129 at 61.622 kb on + strand, within Dshi_4129 at 61.640 kb on - strand, within Dshi_4129 at 61.640 kb on - strand, within Dshi_4129 at 61.650 kb on + strand, within Dshi_4129 at 61.663 kb on - strand, within Dshi_4129 at 61.663 kb on - strand, within Dshi_4129 at 61.671 kb on + strand, within Dshi_4129 at 61.675 kb on - strand, within Dshi_4129 at 61.675 kb on - strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.727 kb on - strand, within Dshi_4129 at 61.749 kb on - strand, within Dshi_4129 at 61.777 kb on + strand, within Dshi_4129 at 61.788 kb on + strand, within Dshi_4129 at 61.809 kb on + strand at 61.817 kb on - strand at 61.841 kb on - strand at 61.898 kb on + strand at 61.908 kb on + strand at 61.908 kb on + strand at 61.908 kb on + strand at 61.911 kb on - strand at 61.911 kb on - strand at 61.916 kb on - strand at 61.916 kb on - strand at 61.937 kb on + strand at 61.937 kb on + strand at 61.945 kb on - strand at 61.945 kb on - strand at 61.984 kb on - strand at 62.006 kb on - strand at 62.017 kb on + strand at 62.026 kb on - strand at 62.037 kb on - strand at 62.063 kb on + strand at 62.071 kb on - strand at 62.071 kb on - strand at 62.071 kb on - strand at 62.076 kb on - strand at 62.090 kb on - strand at 62.137 kb on - strand at 62.137 kb on - strand at 62.142 kb on + strand at 62.145 kb on + strand at 62.191 kb on - strand at 62.196 kb on + strand at 62.212 kb on + strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.222 kb on + strand at 62.230 kb on - strand at 62.246 kb on + strand at 62.246 kb on + strand at 62.246 kb on + strand at 62.254 kb on - strand at 62.261 kb on + strand at 62.261 kb on + strand at 62.269 kb on - strand at 62.269 kb on - strand at 62.275 kb on + strand at 62.277 kb on - strand at 62.298 kb on - strand at 62.306 kb on - strand at 62.329 kb on + strand at 62.374 kb on - strand at 64.520 kb on + strand at 64.556 kb on - strand at 64.586 kb on - strand at 64.586 kb on - strand at 64.599 kb on + strand at 64.641 kb on - strand at 64.690 kb on - strand at 65.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 61,344 - Dshi_4129 0.58 -1.2 61,393 - Dshi_4129 0.61 -0.7 61,411 + Dshi_4129 0.63 -0.0 61,477 + Dshi_4129 0.67 -1.2 61,511 + Dshi_4129 0.70 +0.7 61,609 - Dshi_4129 0.76 -0.6 61,609 - Dshi_4129 0.76 +1.3 61,622 + Dshi_4129 0.77 +1.8 61,640 - Dshi_4129 0.79 -3.2 61,640 - Dshi_4129 0.79 -0.3 61,650 + Dshi_4129 0.79 +0.8 61,663 - Dshi_4129 0.80 +2.0 61,663 - Dshi_4129 0.80 -0.6 61,671 + Dshi_4129 0.81 +0.7 61,675 - Dshi_4129 0.81 +0.0 61,675 - Dshi_4129 0.81 +3.1 61,700 + Dshi_4129 0.83 -0.4 61,700 + Dshi_4129 0.83 -0.2 61,700 + Dshi_4129 0.83 -0.9 61,727 - Dshi_4129 0.85 -0.5 61,749 - Dshi_4129 0.86 +0.7 61,777 + Dshi_4129 0.88 +0.3 61,788 + Dshi_4129 0.89 +2.3 61,809 + -1.7 61,817 - -0.6 61,841 - +0.3 61,898 + +0.6 61,908 + -2.0 61,908 + +2.8 61,908 + -0.7 61,911 - -0.0 61,911 - -0.6 61,916 - +0.3 61,916 - -0.1 61,937 + -0.1 61,937 + -1.3 61,945 - +0.3 61,945 - -1.7 61,984 - -0.1 62,006 - -1.4 62,017 + -1.6 62,026 - -0.2 62,037 - +0.1 62,063 + +1.8 62,071 - -1.1 62,071 - -0.8 62,071 - +0.6 62,076 - -0.2 62,090 - +3.4 62,137 - -1.9 62,137 - -0.1 62,142 + +0.5 62,145 + -2.3 62,191 - +1.2 62,196 + -2.1 62,212 + +0.5 62,220 - +0.9 62,220 - -2.0 62,220 - -2.3 62,220 - -1.3 62,220 - +2.1 62,220 - -0.7 62,222 + +0.4 62,230 - -2.6 62,246 + +1.8 62,246 + +0.5 62,246 + +0.7 62,254 - -0.2 62,261 + -0.3 62,261 + +0.5 62,269 - +0.7 62,269 - -0.4 62,275 + +0.4 62,277 - -0.9 62,298 - +0.3 62,306 - -0.9 62,329 + +1.0 62,374 - -0.5 64,520 + +1.5 64,556 - -0.5 64,586 - -0.4 64,586 - +1.3 64,599 + +0.7 64,641 - +0.7 64,690 - +0.7 65,724 + +0.7
Or see this region's nucleotide sequence