Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3888

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
110,108	-		Dshi_3886	0.11	+0.7
110,137	+		Dshi_3886	0.16	-0.7
110,137	+		Dshi_3886	0.16	-0.1
110,145	-		Dshi_3886	0.17	+1.5
110,145	-		Dshi_3886	0.17	+0.4
110,168	-		Dshi_3886	0.21	+0.9
110,194	+		Dshi_3886	0.25	-1.4
110,221	+		Dshi_3886	0.29	+3.9
110,262	+		Dshi_3886	0.36	-0.6
110,314	+		Dshi_3886	0.44	+1.4
110,316	-		Dshi_3886	0.44	+0.6
110,333	-		Dshi_3886	0.47	-1.2
110,362	-		Dshi_3886	0.52	+3.7
110,427	-		Dshi_3886	0.62	+0.1
110,439	-		Dshi_3886	0.64	-0.8
110,485	+		Dshi_3886	0.72	-0.9
110,488	+		Dshi_3886	0.72	+0.5
110,527	-		Dshi_3886	0.79	-0.0
110,572	+		Dshi_3886	0.86	+2.1
110,575	-		Dshi_3886	0.86	+0.7
110,611	-				-0.4
110,642	+				-0.2
110,647	+				+1.7
110,660	+				-1.4
110,687	+				-0.4
110,711	-		Dshi_3887	0.11	+1.1
110,743	+		Dshi_3887	0.19	+0.8
110,882	-		Dshi_3887	0.51	+1.7
110,901	+		Dshi_3887	0.55	-0.9
110,968	-		Dshi_3887	0.71	+0.2
111,031	-		Dshi_3887	0.85	-0.9
111,110	+				+0.0
111,113	+				-0.5
111,129	-				+0.3
111,139	-				+3.0
111,171	+				-0.2
111,202	+				+0.9
111,202	+				-0.7
111,210	-				-0.9
111,210	-				+0.7
111,257	-		Dshi_3888	0.10	-0.8
111,259	-		Dshi_3888	0.10	-1.4
111,264	+		Dshi_3888	0.11	+0.3
111,298	-		Dshi_3888	0.13	+0.9
111,304	+		Dshi_3888	0.13	-1.9
111,309	+		Dshi_3888	0.13	-0.8
111,322	-		Dshi_3888	0.14	-1.3
111,353	+		Dshi_3888	0.16	+0.1
111,376	-		Dshi_3888	0.18	+0.2
111,410	-		Dshi_3888	0.20	-1.6
111,418	+		Dshi_3888	0.20	+1.7
111,425	+		Dshi_3888	0.21	+1.4
111,425	+		Dshi_3888	0.21	+3.8
111,430	+		Dshi_3888	0.21	-0.1
111,433	-		Dshi_3888	0.21	-1.5
111,438	-		Dshi_3888	0.21	+0.7
111,438	-		Dshi_3888	0.21	+0.7
111,465	+		Dshi_3888	0.23	-1.1
111,473	-		Dshi_3888	0.23	-0.7
111,476	+		Dshi_3888	0.24	-1.2
111,479	-		Dshi_3888	0.24	+0.3
111,531	+		Dshi_3888	0.27	+1.4
111,534	-		Dshi_3888	0.27	+1.7
111,593	+		Dshi_3888	0.31	-0.5
111,603	+		Dshi_3888	0.31	-0.1
111,667	+		Dshi_3888	0.35	+0.9
111,685	-		Dshi_3888	0.37	+0.0
111,735	+		Dshi_3888	0.40	-0.1
111,754	-		Dshi_3888	0.41	+0.4
111,866	+		Dshi_3888	0.48	+0.0
111,903	-		Dshi_3888	0.50	-0.5
111,985	-		Dshi_3888	0.55	+2.3
112,049	+		Dshi_3888	0.59	-0.1
112,052	+		Dshi_3888	0.59	-0.0
112,121	-		Dshi_3888	0.63	-0.3
112,126	-		Dshi_3888	0.64	-1.6
112,136	-		Dshi_3888	0.64	+0.1
112,146	+		Dshi_3888	0.65	-1.0
112,193	+		Dshi_3888	0.68	-0.0
112,210	+		Dshi_3888	0.69	-0.2
112,233	+		Dshi_3888	0.70	+2.3
112,241	-		Dshi_3888	0.71	-2.1
112,332	-		Dshi_3888	0.76	+0.5
112,425	-		Dshi_3888	0.82	+1.2
112,578	+				-1.0
112,586	-				-2.0
112,595	+				+0.7
112,596	-				-0.5
112,841	+		Dshi_3889	0.14	-0.7
112,841	+		Dshi_3889	0.14	-0.9
112,890	-		Dshi_3889	0.21	-0.1
112,929	+		Dshi_3889	0.26	-0.3
112,981	-		Dshi_3889	0.34	-1.2
112,996	+		Dshi_3889	0.36	+0.8
112,996	+		Dshi_3889	0.36	+0.7
113,094	+		Dshi_3889	0.49	+0.4
113,098	+		Dshi_3889	0.50	-0.3
113,106	-		Dshi_3889	0.51	-1.1
113,106	-		Dshi_3889	0.51	-0.2
113,106	-		Dshi_3889	0.51	-0.2
113,121	+		Dshi_3889	0.53	+0.3
113,129	-		Dshi_3889	0.54	-3.9
113,129	-		Dshi_3889	0.54	-0.2
113,143	+		Dshi_3889	0.56	-0.8
113,153	+		Dshi_3889	0.57	-0.9
113,161	-				+2.0
113,273	-		Dshi_3889	0.74	+1.7
113,310	+		Dshi_3889	0.79	+1.7
113,394	-				-0.9
113,394	-				-0.9
113,426	-				-1.1
113,438	+				+2.7
113,445	+				-0.5
113,506	+				+2.9
113,609	-		Dshi_3890	0.41	+0.6