Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3247

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
3,415,132	+		Dshi_3246	0.34	-1.8
3,415,133	-		Dshi_3246	0.34	-0.6
3,415,375	+		Dshi_3246	0.52	-1.8
3,415,432	+		Dshi_3246	0.56	+0.4
3,415,432	+		Dshi_3246	0.56	-2.7
3,415,478	-		Dshi_3246	0.59	-1.7
3,415,494	+		Dshi_3246	0.60	-0.6
3,415,502	-		Dshi_3246	0.61	+2.4
3,415,530	-		Dshi_3246	0.63	+0.8
3,415,583	-		Dshi_3246	0.67	+2.4
3,415,625	+		Dshi_3246	0.70	-1.5
3,415,635	-		Dshi_3246	0.71	+0.4
3,415,654	+		Dshi_3246	0.72	-1.8
3,415,654	+		Dshi_3246	0.72	-2.2
3,415,665	+		Dshi_3246	0.73	-0.4
3,415,750	+		Dshi_3246	0.79	-0.9
3,415,790	+		Dshi_3246	0.82	+0.1
3,415,800	+		Dshi_3246	0.83	-1.0
3,415,885	+		Dshi_3246	0.89	-1.0
3,415,895	+				+1.4
3,415,946	+				-1.1
3,415,954	-				-1.0
3,415,989	+				-1.6
3,415,997	-				-1.2
3,415,997	-				-1.8
3,416,017	+				-1.4
3,416,029	+				+0.4
3,416,066	-				+0.2
3,416,141	+				+1.7
3,416,174	-		Dshi_3247	0.13	-0.2
3,416,281	+		Dshi_3247	0.41	-0.5
3,416,281	+		Dshi_3247	0.41	-0.1
3,416,355	+		Dshi_3247	0.61	-0.6
3,416,363	-		Dshi_3247	0.63	-0.5
3,416,403	-		Dshi_3247	0.73	-1.9
3,416,457	+		Dshi_3247	0.87	-1.3
3,416,457	+		Dshi_3247	0.87	-1.5
3,416,467	-				-1.0
3,416,481	-				-0.4
3,416,498	-				-0.4
3,416,498	-				+1.4
3,416,508	-				-2.0
3,416,515	-				-1.3
3,416,536	-				-2.0
3,416,537	-				+2.4
3,416,558	+		Dshi_3248	0.12	-1.2
3,416,573	+		Dshi_3248	0.16	-0.7
3,416,573	+		Dshi_3248	0.16	-3.7
3,416,580	-		Dshi_3248	0.18	-0.5
3,416,641	-		Dshi_3248	0.33	-0.3
3,416,651	-		Dshi_3248	0.36	-1.7
3,416,701	-		Dshi_3248	0.48	-1.1
3,416,761	-		Dshi_3248	0.64	-1.2
3,416,882	+				-2.6
3,416,891	+				-2.1
3,416,947	+		Dshi_3249	0.10	-0.4
3,416,947	+		Dshi_3249	0.10	+0.9
3,416,950	+		Dshi_3249	0.11	-0.7
3,416,955	-		Dshi_3249	0.13	-1.0
3,416,958	+		Dshi_3249	0.14	+2.3
3,416,998	-		Dshi_3249	0.29	-0.5
3,417,026	-		Dshi_3249	0.39	+1.3
3,417,084	+		Dshi_3249	0.59	-2.0
3,417,084	+		Dshi_3249	0.59	-0.7
3,417,148	+		Dshi_3249	0.82	-1.2
3,417,229	-		Dshi_3250	0.12	-1.7
3,417,247	+		Dshi_3250	0.19	-0.8
3,417,247	+		Dshi_3250	0.19	+0.7
3,417,255	-		Dshi_3250	0.22	+0.3
3,417,308	+		Dshi_3250	0.42	-0.4
3,417,314	-		Dshi_3250	0.44	-1.2
3,417,320	+		Dshi_3250	0.46	-1.8
3,417,321	-		Dshi_3250	0.47	-4.4
3,417,337	+		Dshi_3250	0.53	+0.2
3,417,337	+		Dshi_3250	0.53	+0.3
3,417,357	+		Dshi_3250	0.60	-1.1
3,417,359	-		Dshi_3250	0.61	-0.2
3,417,456	+				+0.3
3,417,464	-				+1.3
3,417,464	-				-0.8
3,417,490	+				-0.7