Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3181

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
3,342,638	+		Dshi_3180	0.49	+1.7
3,342,638	+		Dshi_3180	0.49	+0.4
3,342,638	+		Dshi_3180	0.49	-0.9
3,342,638	+		Dshi_3180	0.49	-0.6
3,342,646	-		Dshi_3180	0.50	+0.8
3,342,646	-		Dshi_3180	0.50	-1.5
3,342,646	-		Dshi_3180	0.50	+0.1
3,342,652	-		Dshi_3180	0.50	-1.0
3,342,693	-		Dshi_3180	0.53	-0.8
3,342,818	-		Dshi_3180	0.60	-0.9
3,342,841	-		Dshi_3180	0.61	-0.6
3,342,941	-		Dshi_3180	0.67	-3.9
3,342,961	-		Dshi_3180	0.68	+1.0
3,343,006	-		Dshi_3180	0.70	-1.6
3,343,044	+		Dshi_3180	0.73	+1.2
3,343,160	+		Dshi_3180	0.79	-1.0
3,343,166	+		Dshi_3180	0.80	-1.7
3,343,202	-		Dshi_3180	0.82	-0.6
3,343,212	+		Dshi_3180	0.82	-0.0
3,343,213	-		Dshi_3180	0.82	+0.1
3,343,251	+		Dshi_3180	0.84	+3.6
3,343,267	-		Dshi_3180	0.85	-0.6
3,343,302	-		Dshi_3180	0.87	-0.9
3,343,376	+				+2.0
3,343,378	-				+2.0
3,343,422	+				+1.8
3,343,437	-				-0.2
3,343,544	-				-0.1
3,343,563	-				-0.7
3,343,596	+				-1.4
3,343,612	-				-0.8
3,343,627	+				+1.0
3,343,627	+				+0.2
3,343,634	+				+0.1
3,343,649	+				+0.0
3,343,730	-				+0.7
3,343,745	+				+1.0
3,343,829	+				-0.4
3,343,837	-				+0.4
3,343,844	+		Dshi_3181	0.10	+2.0
3,343,876	-		Dshi_3181	0.12	+0.4
3,344,047	-		Dshi_3181	0.20	-0.7
3,344,072	+		Dshi_3181	0.21	+2.0
3,344,074	+		Dshi_3181	0.21	+1.0
3,344,083	-		Dshi_3181	0.22	-1.3
3,344,127	+		Dshi_3181	0.24	+1.4
3,344,177	-		Dshi_3181	0.26	+2.4
3,344,177	-		Dshi_3181	0.26	+1.3
3,344,238	+		Dshi_3181	0.29	-0.6
3,344,246	-				+0.4
3,344,270	+		Dshi_3181	0.31	-0.3
3,344,308	-		Dshi_3181	0.33	-0.0
3,344,314	-		Dshi_3181	0.33	-2.4
3,344,394	+		Dshi_3181	0.37	+2.4
3,344,408	+		Dshi_3181	0.37	+1.4
3,344,475	+		Dshi_3181	0.41	+2.6
3,344,512	-		Dshi_3181	0.42	+0.7
3,344,530	-		Dshi_3181	0.43	-1.3
3,344,683	+		Dshi_3181	0.51	-2.1
3,344,725	-		Dshi_3181	0.53	-1.9
3,344,759	-		Dshi_3181	0.54	+2.0
3,344,774	+		Dshi_3181	0.55	+0.8
3,344,882	-		Dshi_3181	0.60	-0.7
3,344,882	-		Dshi_3181	0.60	-0.2
3,344,967	-		Dshi_3181	0.64	-0.4
3,344,989	+		Dshi_3181	0.66	-1.0
3,344,997	-		Dshi_3181	0.66	-0.8
3,345,067	+		Dshi_3181	0.69	-2.5
3,345,072	+		Dshi_3181	0.70	-0.1
3,345,080	+		Dshi_3181	0.70	+1.4
3,345,116	+		Dshi_3181	0.72	-1.7
3,345,182	+		Dshi_3181	0.75	+0.6
3,345,195	-		Dshi_3181	0.75	+0.7
3,345,291	-		Dshi_3181	0.80	-0.7
3,345,296	-		Dshi_3181	0.80	-0.3
3,345,326	+		Dshi_3181	0.82	-1.1
3,345,326	-		Dshi_3181	0.82	+2.8
3,345,369	-		Dshi_3181	0.84	-3.1
3,345,379	-		Dshi_3181	0.84	+1.3
3,345,387	-		Dshi_3181	0.85	+1.4
3,345,458	-		Dshi_3181	0.88	+0.3
3,345,463	-		Dshi_3181	0.88	+0.9
3,345,475	+		Dshi_3181	0.89	+1.4
3,345,549	+				+1.1
3,345,674	+				+3.0
3,345,695	+				-0.9
3,345,760	-				-1.4
3,345,796	-				-0.2
3,345,896	+				-2.6
3,345,896	+		Dshi_3182	0.17	-1.6
3,345,896	+		Dshi_3182	0.17	-0.1
3,345,933	-		Dshi_3182	0.20	-0.6
3,345,941	-		Dshi_3182	0.20	-0.9
3,345,945	+		Dshi_3182	0.21	-0.2
3,346,089	+		Dshi_3182	0.33	-0.3
3,346,102	+		Dshi_3182	0.34	-2.1
3,346,113	+		Dshi_3182	0.35	+1.0
3,346,144	-		Dshi_3182	0.38	+2.4
3,346,163	-		Dshi_3182	0.39	-0.2
3,346,362	+		Dshi_3182	0.56	-0.4
3,346,389	+		Dshi_3182	0.58	+0.3
3,346,412	+		Dshi_3182	0.60	+1.4
3,346,430	-		Dshi_3182	0.62	-0.3
3,346,489	+		Dshi_3182	0.66	-1.1
3,346,497	-		Dshi_3182	0.67	+2.0
3,346,504	-		Dshi_3182	0.68	+0.4
3,346,547	+		Dshi_3182	0.71	-1.8
3,346,590	-		Dshi_3182	0.75	+0.4
3,346,663	-		Dshi_3182	0.81	-0.7