Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1960

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
2,055,180	-				+0.3
2,055,261	+		Dshi_5003	0.13	+0.3
2,055,269	-		Dshi_5003	0.14	-1.4
2,055,269	-		Dshi_5003	0.14	-2.7
2,055,281	+		Dshi_5003	0.15	-0.4
2,055,407	+		Dshi_5003	0.29	-1.7
2,055,647	+		Dshi_5003	0.55	-0.7
2,055,687	-		Dshi_5003	0.60	+0.3
2,055,776	-		Dshi_5003	0.69	+0.3
2,056,012	-				+0.3
2,056,119	+				-0.0
2,056,153	+				-0.7
2,056,434	+		Dshi_1960	0.23	-0.7
2,056,446	+		Dshi_1960	0.24	+0.3
2,056,454	-		Dshi_1960	0.25	-1.7
2,056,540	+		Dshi_1960	0.30	-0.8
2,056,543	-		Dshi_1960	0.30	+0.3
2,056,617	-		Dshi_1960	0.35	-2.8
2,056,679	-		Dshi_1960	0.39	-3.1
2,056,759	+		Dshi_1960	0.44	+0.3
2,056,881	+		Dshi_1960	0.51	-1.7
2,056,967	-		Dshi_1960	0.57	+0.3
2,057,038	-		Dshi_1960	0.61	-0.3
2,057,055	+		Dshi_1960	0.62	-0.9
2,057,197	-		Dshi_1960	0.71	-0.4
2,057,207	+		Dshi_1960	0.71	-1.1
2,057,372	-		Dshi_1960	0.82	+3.8
2,057,535	-				+0.2
2,057,588	-				+0.2
2,057,608	+				-0.5
2,057,865	+		Dshi_1961	0.64	+0.2
2,057,873	-		Dshi_1961	0.67	-2.1
2,057,887	-		Dshi_1961	0.71	-1.6
2,057,955	+				-0.8
2,058,044	+				+0.2
2,058,063	+				+1.2
2,058,149	-				-3.3
2,058,153	+				+0.6
2,058,241	-				-2.8
2,058,241	-				-1.6
2,058,289	-				-1.7
2,058,363	+				-1.7
2,058,380	+				-1.3
2,058,405	+				-2.1
2,058,608	+		Dshi_1962	0.13	+0.2