Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1779 and Dshi_1780 overlap by 1 nucleotides Dshi_1780 and Dshi_1781 are separated by 57 nucleotides Dshi_1781 and Dshi_1782 are separated by 104 nucleotides
Dshi_1779: Dshi_1779 - acetolactate synthase, large subunit, biosynthetic type (RefSeq), at 1,848,348 to 1,850,105
_1779
Dshi_1780: Dshi_1780 - hypothetical protein (RefSeq), at 1,850,105 to 1,850,416
_1780
Dshi_1781: Dshi_1781 - acetolactate synthase, small subunit (RefSeq), at 1,850,474 to 1,851,046
_1781
Dshi_1782: Dshi_1782 - Rieske (2Fe-2S) domain protein (RefSeq), at 1,851,151 to 1,852,302
_1782
Position (kb)
1850
1851
1852 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1850.151 kb on + strand, within Dshi_1780 at 1850.270 kb on + strand, within Dshi_1780 at 1850.272 kb on - strand, within Dshi_1780 at 1850.410 kb on - strand at 1850.449 kb on + strand at 1850.555 kb on + strand, within Dshi_1781 at 1850.569 kb on - strand, within Dshi_1781 at 1850.722 kb on - strand, within Dshi_1781 at 1850.771 kb on + strand, within Dshi_1781 at 1850.779 kb on - strand, within Dshi_1781 at 1850.794 kb on + strand, within Dshi_1781 at 1850.861 kb on - strand, within Dshi_1781 at 1851.253 kb on - strand at 1851.376 kb on + strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.459 kb on + strand, within Dshi_1782 at 1851.512 kb on + strand, within Dshi_1782 at 1851.520 kb on - strand, within Dshi_1782 at 1851.520 kb on - strand, within Dshi_1782 at 1851.549 kb on - strand, within Dshi_1782 at 1851.574 kb on - strand, within Dshi_1782 at 1851.622 kb on - strand, within Dshi_1782 at 1851.642 kb on - strand, within Dshi_1782 at 1851.683 kb on + strand, within Dshi_1782 at 1851.713 kb on - strand, within Dshi_1782 at 1851.728 kb on + strand, within Dshi_1782 at 1851.794 kb on + strand, within Dshi_1782 at 1851.875 kb on + strand, within Dshi_1782 at 1852.017 kb on + strand, within Dshi_1782
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.01 mg/ml remove 1,850,151 + Dshi_1780 0.15 +1.1 1,850,270 + Dshi_1780 0.53 -0.5 1,850,272 - Dshi_1780 0.54 -0.9 1,850,410 - +2.1 1,850,449 + +1.9 1,850,555 + Dshi_1781 0.14 -0.8 1,850,569 - Dshi_1781 0.17 -0.9 1,850,722 - Dshi_1781 0.43 +0.6 1,850,771 + Dshi_1781 0.52 +1.1 1,850,779 - Dshi_1781 0.53 +1.6 1,850,794 + Dshi_1781 0.56 +2.1 1,850,861 - Dshi_1781 0.68 +2.7 1,851,253 - +3.1 1,851,376 + Dshi_1782 0.20 -2.1 1,851,384 - Dshi_1782 0.20 -1.4 1,851,384 - Dshi_1782 0.20 -0.6 1,851,384 - Dshi_1782 0.20 +0.5 1,851,459 + Dshi_1782 0.27 -2.1 1,851,512 + Dshi_1782 0.31 +0.1 1,851,520 - Dshi_1782 0.32 -1.3 1,851,520 - Dshi_1782 0.32 -0.9 1,851,549 - Dshi_1782 0.35 +0.7 1,851,574 - Dshi_1782 0.37 -0.9 1,851,622 - Dshi_1782 0.41 -1.5 1,851,642 - Dshi_1782 0.43 -0.9 1,851,683 + Dshi_1782 0.46 +1.1 1,851,713 - Dshi_1782 0.49 -2.5 1,851,728 + Dshi_1782 0.50 +0.1 1,851,794 + Dshi_1782 0.56 +1.1 1,851,875 + Dshi_1782 0.63 +0.7 1,852,017 + Dshi_1782 0.75 -2.7
Or see this region's nucleotide sequence