Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1648

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
1,711,216	+		Dshi_1647	0.19	+1.2
1,711,353	+		Dshi_1647	0.37	+1.3
1,711,370	+		Dshi_1647	0.39	+0.7
1,711,469	+		Dshi_1647	0.52	+0.1
1,711,499	+		Dshi_1647	0.56	-0.2
1,711,629	+		Dshi_1647	0.72	+0.2
1,711,769	+				+1.1
1,711,850	-				+0.1
1,711,946	-				-0.4
1,711,987	+				+1.0
1,712,079	-				+2.6
1,712,186	+				+1.4
1,712,237	-		Dshi_1648	0.10	+1.9
1,712,266	+		Dshi_1648	0.13	+1.6
1,712,277	+		Dshi_1648	0.14	+1.7
1,712,334	-		Dshi_1648	0.19	+2.0
1,712,379	-		Dshi_1648	0.23	+2.7
1,712,413	+		Dshi_1648	0.26	+2.0
1,712,459	-		Dshi_1648	0.30	+3.8
1,712,476	+		Dshi_1648	0.32	+1.5
1,712,482	+		Dshi_1648	0.32	+2.1
1,712,536	+		Dshi_1648	0.37	+1.6
1,712,580	+		Dshi_1648	0.41	+1.5
1,712,588	-		Dshi_1648	0.42	+2.1
1,712,590	+		Dshi_1648	0.42	+1.4
1,712,598	-		Dshi_1648	0.43	+1.1
1,712,598	-		Dshi_1648	0.43	+2.0
1,712,679	-		Dshi_1648	0.50	+1.9
1,712,791	-		Dshi_1648	0.60	+1.7
1,712,845	+		Dshi_1648	0.65	+2.2
1,712,896	+		Dshi_1648	0.69	+1.2
1,712,898	-		Dshi_1648	0.69	+1.1
1,712,966	-		Dshi_1648	0.75	+1.9
1,712,969	-		Dshi_1648	0.76	+0.8
1,713,021	-		Dshi_1648	0.80	+1.4
1,713,191	-				+1.2
1,713,210	-				+1.9
1,713,210	-				+1.5
1,713,215	-				+2.1
1,713,263	+				+1.2
1,713,289	+				+2.0
1,713,309	-				+0.9
1,713,309	-				+2.0
1,713,349	-				+2.3
1,713,388	+				+1.3
1,713,390	-				+0.9
1,713,519	-		Dshi_1649	0.14	+2.7
1,713,610	-		Dshi_1649	0.20	+1.7
1,713,747	-		Dshi_1649	0.28	+3.3
1,713,812	+		Dshi_1649	0.32	+2.0
1,713,839	-		Dshi_1649	0.34	+3.1
1,713,898	+		Dshi_1649	0.37	+0.2
1,713,952	+		Dshi_1649	0.40	+2.6
1,714,048	-		Dshi_1649	0.46	+1.8
1,714,077	-		Dshi_1649	0.48	+1.4
1,714,098	-		Dshi_1649	0.49	+1.5
1,714,177	-		Dshi_1649	0.54	+5.0
1,714,201	-		Dshi_1649	0.55	+1.7
1,714,228	+		Dshi_1649	0.57	+0.6
1,714,233	+		Dshi_1649	0.57	+0.5