Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1376
Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,429,153 | - | Dshi_1375 | 0.41 | -1.5 | |
1,429,231 | + | Dshi_1375 | 0.47 | -0.8 | |
1,429,648 | + | Dshi_1375 | 0.82 | -0.4 | |
1,429,954 | - | +1.1 | |||
1,430,128 | + | Dshi_1376 | 0.27 | +1.1 | |
1,430,169 | + | Dshi_1376 | 0.32 | +0.7 | |
1,430,172 | - | Dshi_1376 | 0.32 | -0.5 | |
1,430,879 | + | Dshi_1377 | 0.19 | -0.5 | |
1,430,886 | + | Dshi_1377 | 0.20 | -0.9 | |
1,430,966 | + | Dshi_1377 | 0.29 | -1.4 | |
1,431,002 | - | Dshi_1377 | 0.33 | +0.1 | |
1,431,157 | - | Dshi_1377 | 0.50 | -2.0 | |
1,431,170 | + | Dshi_1377 | 0.51 | +0.5 | |
1,431,385 | + | Dshi_1377 | 0.75 | +1.2 | |
1,431,385 | + | Dshi_1377 | 0.75 | +1.3 | |
1,431,393 | - | Dshi_1377 | 0.76 | +0.1 | |
1,431,538 | + | -1.2 | |||
1,431,551 | - | -0.9 | |||
1,431,625 | + | -0.1 |
Or see this region's nucleotide sequence