Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1277
Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,326,146 | + | Dshi_1275 | 0.87 | -0.1 | |
1,326,265 | - | -1.1 | |||
1,326,265 | - | -1.3 | |||
1,326,306 | - | -0.4 | |||
1,326,306 | - | -1.2 | |||
1,326,459 | + | Dshi_1276 | 0.21 | -2.0 | |
1,326,692 | - | Dshi_1276 | 0.50 | +0.0 | |
1,326,731 | - | Dshi_1276 | 0.55 | -0.9 | |
1,326,786 | - | Dshi_1276 | 0.62 | +0.5 | |
1,326,951 | + | Dshi_1276 | 0.83 | +2.1 | |
1,326,966 | + | Dshi_1276 | 0.85 | -0.6 | |
1,326,987 | + | Dshi_1276 | 0.87 | -0.2 | |
1,327,114 | - | Dshi_1277 | 0.16 | -0.7 | |
1,327,178 | - | Dshi_1277 | 0.43 | -0.6 | |
1,327,195 | + | Dshi_1277 | 0.50 | +2.1 | |
1,327,195 | + | Dshi_1277 | 0.50 | -2.5 | |
1,327,203 | - | Dshi_1277 | 0.53 | +0.5 | |
1,327,238 | - | Dshi_1277 | 0.67 | -1.2 | |
1,327,322 | + | +0.1 | |||
1,327,362 | - | -0.0 | |||
1,327,537 | + | Dshi_1278 | 0.19 | +0.1 | |
1,327,539 | + | Dshi_1278 | 0.19 | +2.1 | |
1,327,547 | - | Dshi_1278 | 0.20 | +0.1 | |
1,327,565 | + | Dshi_1278 | 0.22 | +1.1 | |
1,327,644 | - | Dshi_1278 | 0.28 | -1.0 | |
1,327,768 | + | Dshi_1278 | 0.39 | -0.6 | |
1,327,827 | + | Dshi_1278 | 0.44 | +1.1 | |
1,327,930 | - | Dshi_1278 | 0.53 | -2.3 | |
1,327,961 | + | Dshi_1278 | 0.55 | +1.6 | |
1,328,057 | - | Dshi_1278 | 0.64 | +1.1 | |
1,328,059 | - | Dshi_1278 | 0.64 | +1.1 |
Or see this region's nucleotide sequence