Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1227

Experiment: m.b. A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.01 mg/ml
1,268,521	+		Dshi_1225	0.61	+1.0
1,268,743	+		Dshi_1225	0.75	+0.4
1,268,959	+		Dshi_1225	0.89	+1.0
1,268,959	+		Dshi_1225	0.89	+2.8
1,268,959	+		Dshi_1225	0.89	+1.2
1,268,959	+		Dshi_1225	0.89	-1.5
1,268,967	-		Dshi_1225	0.89	+2.3
1,269,107	+				-0.1
1,269,127	+				-0.8
1,269,171	-		Dshi_1226	0.19	+0.2
1,269,432	-				+0.2
1,269,476	+				-0.3
1,269,495	+				-0.5
1,269,495	+				+0.4
1,269,503	-				+1.8
1,269,555	+				-1.4
1,269,577	+				+1.0
1,269,586	+				-0.2
1,269,619	+				-0.5
1,269,632	+				+0.3
1,269,645	+				-2.0
1,269,646	-				+0.2
1,269,819	-		Dshi_1227	0.16	-1.4
1,269,937	+		Dshi_1227	0.21	+0.9
1,270,016	+		Dshi_1227	0.25	+0.2
1,270,029	-		Dshi_1227	0.26	-3.5
1,270,333	+		Dshi_1227	0.39	-0.5
1,270,341	-				-0.8
1,270,419	-		Dshi_1227	0.43	-0.8
1,270,490	+		Dshi_1227	0.47	-0.4
1,270,561	+		Dshi_1227	0.50	-0.5
1,270,777	-		Dshi_1227	0.60	-1.2
1,270,799	-		Dshi_1227	0.61	-1.6
1,270,888	-		Dshi_1227	0.65	+0.1
1,270,966	-		Dshi_1227	0.69	-0.2
1,271,269	+		Dshi_1227	0.83	+0.8
1,271,275	-		Dshi_1227	0.83	-3.2
1,271,275	-		Dshi_1227	0.83	-0.5
1,271,303	-		Dshi_1227	0.84	-0.8
1,271,313	-		Dshi_1227	0.85	-0.8
1,271,347	-		Dshi_1227	0.86	-1.4
1,271,496	-				-0.2
1,271,540	+				-0.8
1,271,641	+				+0.6
1,271,761	+				-1.0
1,271,779	-		Dshi_1228	0.11	+0.8
1,271,782	+		Dshi_1228	0.12	+1.8
1,271,869	-		Dshi_1228	0.32	+2.2
1,271,879	-		Dshi_1228	0.35	-0.1
1,271,910	-		Dshi_1228	0.42	-0.8
1,272,121	+				-1.1
1,272,148	+				+2.2
1,272,176	+				+0.2
1,272,184	-				-1.5
1,272,196	+				-0.8
1,272,233	-				-0.3
1,272,395	+		Dshi_1229	0.17	-0.1
1,272,401	+		Dshi_1229	0.18	-2.4
1,272,559	+		Dshi_1229	0.38	-2.4
1,272,567	-		Dshi_1229	0.39	-1.5
1,272,577	-		Dshi_1229	0.41	-1.3