Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0964
Experiment: m.b. A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
986,465 | - | -0.1 | |||
986,582 | + | +0.1 | |||
986,625 | + | +1.0 | |||
986,632 | - | -0.8 | |||
986,942 | - | -1.0 | |||
986,994 | + | -0.1 | |||
987,082 | + | +0.8 | |||
987,116 | + | +3.3 | |||
987,126 | + | -0.3 | |||
987,175 | - | +0.6 | |||
987,180 | - | +0.3 | |||
987,207 | + | +2.4 | |||
987,214 | + | +0.2 | |||
987,253 | + | +0.1 | |||
987,265 | + | +0.1 | |||
987,265 | + | +0.5 | |||
987,273 | - | -2.1 | |||
987,290 | - | -0.3 | |||
987,293 | + | -0.6 | |||
987,293 | + | -2.9 | |||
987,310 | + | +2.1 | |||
987,328 | - | +1.5 | |||
987,397 | - | -1.0 | |||
987,426 | - | Dshi_0964 | 0.11 | +0.6 | |
987,470 | - | Dshi_0964 | 0.19 | +0.2 | |
987,470 | - | Dshi_0964 | 0.19 | -0.3 | |
987,496 | + | Dshi_0964 | 0.24 | +0.3 | |
987,649 | + | Dshi_0964 | 0.52 | +0.2 | |
987,649 | + | Dshi_0964 | 0.52 | -1.4 | |
987,657 | - | Dshi_0964 | 0.53 | -1.2 | |
987,775 | - | Dshi_0964 | 0.74 | +1.0 | |
987,795 | - | Dshi_0964 | 0.78 | +0.5 | |
988,008 | - | +0.3 | |||
988,022 | - | +2.0 | |||
988,044 | + | -0.0 | |||
988,052 | - | +1.0 | |||
988,088 | + | Dshi_0965 | 0.17 | +0.4 | |
988,116 | + | Dshi_0965 | 0.25 | +0.7 | |
988,136 | + | Dshi_0965 | 0.31 | +1.5 | |
988,153 | - | Dshi_0965 | 0.36 | +2.2 | |
988,167 | + | Dshi_0965 | 0.40 | -0.1 | |
988,183 | - | Dshi_0965 | 0.44 | -0.2 | |
988,219 | - | Dshi_0965 | 0.54 | +0.1 | |
988,298 | - | Dshi_0965 | 0.77 | -2.4 | |
988,298 | - | Dshi_0965 | 0.77 | -1.7 | |
988,321 | - | Dshi_0965 | 0.83 | -1.6 | |
988,333 | + | Dshi_0965 | 0.86 | -0.3 | |
988,361 | + | -0.6 | |||
988,369 | - | +0.2 | |||
988,376 | + | +0.8 | |||
988,392 | - | +0.7 | |||
988,393 | - | -0.0 | |||
988,548 | - | +0.3 | |||
988,551 | + | -0.5 | |||
988,552 | + | +0.9 | |||
988,555 | - | -1.3 | |||
988,561 | - | +0.2 | |||
988,567 | - | -0.7 | |||
988,663 | + | -0.8 | |||
988,670 | + | +3.0 | |||
988,707 | + | +1.2 | |||
988,715 | - | +0.1 | |||
988,747 | - | -1.0 | |||
988,851 | - | -1.4 |
Or see this region's nucleotide sequence